Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00803 ATGAAGTTTCTTAAAAGAACACTTTCTTTATCAGAACGTGAAGGAACAATAACATCATCAAACAATGGTTCTGTTCCAAAAGGTTATTTAGCTGTGTGTGTTGGTGAAGAACTAAAAAGGTTTATTATACCAACTGAATATTTGGGTCATCAAGCTTTTCAGATTCTTTTAAGAGAAGCTGAAGAAGAATTTGGATTTCAACAAACTGGTGTATTGAGAATTCCTTGTGAAGTTTGTATTTTTGAGAGTATTTTGAAGATGGTTGAAGatggaaagaaaaatgataagtttTCTTCTAATCAAGAATGTAGATCACTTaatattgaagaaatgatgGGATTTTGTTCTTTAGAAAATCAACTTGCTTGTTCTCATCATCCTCAAAGTCCATTGTGCAGATAA 402 0.291 MKFLKRTLSLSEREGTITSSNNGSVPKGYLAVCVGEELKRFIIPTEYLGHQAFQILLREAEEEFGFQQTGVLRIPCEVCIFESILKMVEDGKKNDKFSSNQECRSLNIEEMMGFCSLENQLACSHHPQSPLCR 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00803 133 Pfam Auxin responsive protein 16 88 IPR003676 GO:0009733
Tsu01g00803 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 133 IPR003676 GO:0009733
Tsu01g00803 133 PANTHER SAUR FAMILY PROTEIN 3 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00803 Tsu-Chr1 7232798 7233199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00803 3 133 Calmodulin-binding Proteins AT4G31320 54.887 3.60e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00803 K14488 - gmx:100799598 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00530 07 4147974 4148492 Tsu01g00803 01 7232798 7233199 PCT