Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00486 ATGGGTTGTGCTCAATCTAGAATAGATAACGAAGAATCAGTTGCACGTTGCAAAGATCGTAAAAACTTAATGAGAGAAGCTGTTCTTGCTCGTAACGCTTTCGCCGCCGGTCACTCCGGTTACTCTATGGCTCTCAAAAACACCGGCGCTGCTCTCTCCGATTACGCTCACGGCGAAACTCATCTCGATGACATTCAACTTCACGCGCCTCCTCCTCTTCATTCTTCTCCTAAACCTCCACCGCCACCTCCACCGCCTATGGAAGAAACCCTCCCTCCTCCACCTCTTCCGCCTGATTTCTCACCGGCTTCACTCAAACGCTCTGTCACATTGCCTCCTGTAGCTTTACAGCACCGGAAGTCCACCGGCGGAGGAGGAATCGCTATTGTTGAGGAAAACAATGGCGGTGCAAAAACCGAGGAAGATAAGGGATTGGGATTAGTTCACGCGCCGCCTTCACCTCCTGGAGGTAGTAAAGTGATGCCGCCACCGCCTTTGCCGGATTCGAAGAACATGGCTTGGGATTATTTCTTTATGGATATGAACATGGCAAGAGCTTCtttgaatgaagaagatgagattgagaatgaagaaggtgaaattGAAGGTGAGAATGTTGATGATAATGGAGGAAATGTTGAGGATGAGATTGAACCGAAAACACCGGAGAAAGTTGAGGTTGATGTGTATAACAAGGAGCATGATCATGAAGATGATGACGTGATAAGAGAGGCTACACACATTGAACATTCCAAAACTGCTCCTGCTGAGTTTAGAAGAGCAATTAAGGTGGTTCCAACTGTTACTCTTATGCAGATTCTTGGTTCACTTGATGATCATTTTCTTAAAGCTTCTGAGACTGCTCAACAAGTTTCCAAGATGCTTGAAGCTACTAGGTTGCATTATCATTCTAATTTCGCCGATAATCGGGGTCACATTGATCATTCTGCTAGAGTCATGCGTGTCATAACGTGGAATAAGTCCTTCAAGGGTGTATCTAATGGGGAGGGTGGAAAAGATGATTTTGATTCGGAAGAGTACGAAACACATGCCACTGTTTTGGACAAGTTGTTGGCATGGGAAAAGAAGCTCTATGAAGAGGTCAAGCAAGGTGAGCTTATGAAGtttgaatatcaaagaaaaGTTGCAATTCTGAACAGGCAGAAGAAGCGTGGTGCCAGTGTTGAATCATTAGGAAAAACTAAAGCGGCAGTAAGTCATTTACACACACGATATATTGTTGATATGCAGTCAATGGATTCAACAGTTTCTGAGGTGGACCATATACGCGATGCTCAATTGTATCCAAAACTTGTTTCTCTTGTTTCTGAGATGGCCAATATGTGGGGgaatatgttcatgcatcatgacaGCCAGCTAAAAATAGTTACAGACCTCAAATCTCTTGATATTTCTCAAGATCATAAGGAAACAACCAAACATCATTATGACCGCACCGTGCAGCTTTGGAATGTAATCCAAGAATGGCAGTCACAATTTGAGAAACTTGTGACTCAACAGAAGCATTACATCCAAGCTCTTAATAGCTGGTTGAAGTTAAATCTCATTCCCATCGAAAGCAACCTAAAAGAGAAAATCTCGTCCCCGCCTAGAGCCCAAAATCCACCGATCCAGGCCCTTCTACATGCATGGCACGATTATCTTGACAAGCTTCCTGATGAGCTAGCAAAATCTGCTATTTCCTCCTTTGCCGCAGTGATAAAGACAATCATACTTCAGCAAGAGGAAGAGATGAAGTTAAAGGAGAAATGCGAGGAAACTAGAAAGGAATTCTTGAGAAAAAACCAAGCTTTTGAGGAATGGTACCAGAAGCATTTATATAAAAGGGGGCCAGATGAAGCAGATGAAGTGAATACAAACAATCCGGTCTCAGAGAAGCAGTTTGTCGTTGAGAgcttgaagaagaaattagaaGAAGAAACTGAAGCTCACAAAAAATTGTGCGTTCAGGTAAGAGAAAAATCACTCCAGAGTCTCAAAACTCGCTTGCCTGAGCTCTTCCGTGCACTGTCGGATTATACCCATGCGTGTTCTGATGCTTATGAGAAACTGAAGTTGATTGCTGCACACTCTCAAGGCAACGGTGTGGCATGA 2115 0.4213 MGCAQSRIDNEESVARCKDRKNLMREAVLARNAFAAGHSGYSMALKNTGAALSDYAHGETHLDDIQLHAPPPLHSSPKPPPPPPPPMEETLPPPPLPPDFSPASLKRSVTLPPVALQHRKSTGGGGIAIVEENNGGAKTEEDKGLGLVHAPPSPPGGSKVMPPPPLPDSKNMAWDYFFMDMNMARASLNEEDEIENEEGEIEGENVDDNGGNVEDEIEPKTPEKVEVDVYNKEHDHEDDDVIREATHIEHSKTAPAEFRRAIKVVPTVTLMQILGSLDDHFLKASETAQQVSKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNKSFKGVSNGEGGKDDFDSEEYETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVAILNRQKKRGASVESLGKTKAAVSHLHTRYIVDMQSMDSTVSEVDHIRDAQLYPKLVSLVSEMANMWGNMFMHHDSQLKIVTDLKSLDISQDHKETTKHHYDRTVQLWNVIQEWQSQFEKLVTQQKHYIQALNSWLKLNLIPIESNLKEKISSPPRAQNPPIQALLHAWHDYLDKLPDELAKSAISSFAAVIKTIILQQEEEMKLKEKCEETRKEFLRKNQAFEEWYQKHLYKRGPDEADEVNTNNPVSEKQFVVESLKKKLEEETEAHKKLCVQVREKSLQSLKTRLPELFRALSDYTHACSDAYEKLKLIAAHSQGNGVA 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00486 704 PANTHER DNA LIGASE (DUF630 AND DUF632) 1 698 - -
Tsu07g00486 704 MobiDBLite consensus disorder prediction 65 106 - -
Tsu07g00486 704 MobiDBLite consensus disorder prediction 198 217 - -
Tsu07g00486 704 MobiDBLite consensus disorder prediction 198 212 - -
Tsu07g00486 704 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Tsu07g00486 704 MobiDBLite consensus disorder prediction 72 101 - -
Tsu07g00486 704 Coils Coil 577 597 - -
Tsu07g00486 704 Coils Coil 637 661 - -
Tsu07g00486 704 Pfam Protein of unknown function (DUF632) 270 575 IPR006867 -
Tsu07g00486 704 PANTHER UNCHARACTERIZED 1 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00486 Tsu-Chr7 3816368 3819803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00486 1 598 Acyl Lipid Metabolism Gene Families AT2G27090 24.123 1.72e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00486 - - gmx:100807189 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00486 07 3816368 3819803 Tsu07g00486 07 3816368 3819803 ECH