Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00483 atGGACTATTGCTTAAGAGAATTAGAAGGTAAACAAGCTCATGATCCTTTATTcatgaaaaaaatgaacaatAACAAccacaaatcatcatcaacaacgcCTTCACAGGTCCATGAACAACGCGTGTTTGTTTATGGACCTGTGATCGTTGGAGCCGGACCATCGGGATTAGCAGCAGCAGCTTGTCTCAGAGAAAAAAACATTCCATGTATAATCCTAGAAAGATCTAATTGCATAGCTTCATTATGGCAACTCAAAACCTACGATCGATTACGTCTTCATCTCCCGAAACAATTTTGTGAATTACCCTTCATGGAATTCCCTTCAAATTTCCCAACATACCCTTCAAAGCAACAATTCATAAAGTACTTAGAAGATTATGCGGAAAGGTTTGGAATTAAGCCGCGGTTTAATGAGACAGTTAAAAATGCTGAATTTGATAGTAAAATTGGTTGTTGGAAGTTGAAGAGTTTTAGTAGTAAAGGGGATGTAACGACGGAGTATGTTTGTCGGTGGTTGATCGTTGCCACCGGAGAGAATGCAGAGGCTGTTGTGCCTAATATTGAAGGTGTAGATGAATTTGATGGGATTATAAGACATACAAGTTTGTATAAAAGTGGTGAAGAGTTTAGAGGGAAGAAAGTTTTGGTTGTTGGTTGTGGTAATTCTGGTATGGAAGTTTGTTTGGATCTTTGTAACCATGATGCTACTCCTTCTCTTGTTGTTAGAGATTCAGTACACGTTCTACCACGAGAGATGCTAGGAAAATCAACTTTTGGGTTGTCCATGTGGTTACTTAAATGGTTTCCATTGAGACTTGTCGATAGGTTCTTGCTCATAGTGTCATGGCTTATGCTTGGTGACACTTCTCAACTTGGATTGGATCGTCCTAGTTTGGGTCCCCTTCAACTCAAAAACCTCTCCGGTAAAACTCCTGTCTTAGATGTGGGTACCCTTGCCAAGATTAAAGGTGGACACATTAAGGTACGACCAAGCATAAAGCGGTTAAAACGTCATACAGTGGAATTCATAGATGGAAGGTCAGAGAATTTTGATGGTATCATATTGGCAACTGGTTACAAAAGCAATGTACCCTATTGGCTCAAGGAAGAGGATATGTTCTCTAAGAAAGATGGATTTCCAATGAAGCCATTTCCAAATGGATGGAAAGGTAAAAATGGACTCTATGCGGTAGGTTTTACAAAAAAGGGACTATTAGGTGCATCTATGGATGCCAAAAGAATAGCTGATGACATTGAAAGGTGTTTAGAagctgaaaaataa 1284 0.3785 MDYCLRELEGKQAHDPLFMKKMNNNNHKSSSTTPSQVHEQRVFVYGPVIVGAGPSGLAAAACLREKNIPCIILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMEFPSNFPTYPSKQQFIKYLEDYAERFGIKPRFNETVKNAEFDSKIGCWKLKSFSSKGDVTTEYVCRWLIVATGENAEAVVPNIEGVDEFDGIIRHTSLYKSGEEFRGKKVLVVGCGNSGMEVCLDLCNHDATPSLVVRDSVHVLPREMLGKSTFGLSMWLLKWFPLRLVDRFLLIVSWLMLGDTSQLGLDRPSLGPLQLKNLSGKTPVLDVGTLAKIKGGHIKVRPSIKRLKRHTVEFIDGRSENFDGIILATGYKSNVPYWLKEEDMFSKKDGFPMKPFPNGWKGKNGLYAVGFTKKGLLGASMDAKRIADDIERCLEAEK 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00483 427 Pfam Flavin-binding monooxygenase-like 49 367 IPR020946 GO:0004499|GO:0050660|GO:0050661
Tsu07g00483 427 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 36 426 - -
Tsu07g00483 427 PRINTS FAD-dependent pyridine nucleotide reductase signature 214 232 - -
Tsu07g00483 427 PRINTS FAD-dependent pyridine nucleotide reductase signature 47 66 - -
Tsu07g00483 427 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 36 426 - -
Tsu07g00483 427 Gene3D - 47 427 IPR036188 -
Tsu07g00483 427 PRINTS Pyridine nucleotide disulphide reductase class-II signature 210 234 - -
Tsu07g00483 427 PRINTS Pyridine nucleotide disulphide reductase class-II signature 46 68 - -
Tsu07g00483 427 SUPERFAMILY FAD/NAD(P)-binding domain 48 252 IPR036188 -
Tsu07g00483 427 SUPERFAMILY FAD/NAD(P)-binding domain 211 423 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00483 Tsu-Chr7 3774284 3779188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00483 K11816 - gmx:100799546 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00483 07 3774284 3779188 Tsu07g00483 07 3774284 3779188 ECH