Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00482 ATGGTTGTTCTTCATCTCCCAAAGTTCTTATCCTTCTCTCGCCAAACCTATTCCATTTCAAAACGCACCTTAAACACACTCTTACACCCACCAAAATCCACTCTCACAACTTCAGAACCAAACCTAGTAACAATATCATCATCCACAACAACAATAACCCCTAAACCCCAAACCTCTTTATCTCTCGAAAATATCTTCATTCCTCCAAACACTATTCTCACTGACAACGCTAGAATCTTAAACGGTTCTAATATATTACTCAGTAACTACGCTACCGATGCTCAAATTATACAAGCTGATTTTGTCAAAAGCAGTACTAAAACCGAAGATTGTCCTTCTGACGGTCTTCCTGAATTCGCTCTTGTTGGTCGTTCCAATGTTGGAAAATCTTCGCTTCTTAATTCCATTGTTCGCCGCAAGAAACTCGCTTTAACTTCAAAGAAACCTGgGAAAACACAATTGATTAATCATTTTCGTATTAATGATAGTTGGTACCTGGTTGATTTGCCTGGATATGGGTATGCATCTGCGCCGCAGGAACTTAGAAAGGATTGGGATAAATTCACCAAAGACTATTTTCTTAACCGGTCAACATTGGTTTCAGTTTTCCTTCTAATAGATGGTAGCATTCCTGCTAAAAAAATAGATCTTGAGTATGCACGTTGGTTGGGTGAAAATCAGATCCCAATGACAATAATCTTCACCAAATGTGACAAGcgtaagaagaaaaagaatggaGAAAAGAACGGAGGCAAAAAACCCGAGGATAATGTCAATGATTTTCAGGAGTTGATACGCGGCTACTTCCAAACTGTGCCTCCATGGATCATGACCAGTAATGTCACCCACGAAGGTCGTGATGAGATACTCCTCCACATGGCCCAACTTCGAAACTACTGGCTCCAGCACTAG 912 0.3947 MVVLHLPKFLSFSRQTYSISKRTLNTLLHPPKSTLTTSEPNLVTISSSTTTITPKPQTSLSLENIFIPPNTILTDNARILNGSNILLSNYATDAQIIQADFVKSSTKTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQLINHFRINDSWYLVDLPGYGYASAPQELRKDWDKFTKDYFLNRSTLVSVFLLIDGSIPAKKIDLEYARWLGENQIPMTIIFTKCDKRKKKKNGEKNGGKKPEDNVNDFQELIRGYFQTVPPWIMTSNVTHEGRDEILLHMAQLRNYWLQH 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00482 303 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 99 248 IPR019987 GO:0005525
Tsu07g00482 303 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 49 301 - -
Tsu07g00482 303 CDD YihA_EngB 118 296 IPR030393 GO:0005525
Tsu07g00482 303 Hamap Probable GTP-binding protein EngB [engB]. 104 297 IPR019987 GO:0005525
Tsu07g00482 303 Pfam 50S ribosome-binding GTPase 119 236 IPR006073 GO:0005525
Tsu07g00482 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 299 IPR027417 -
Tsu07g00482 303 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 115 299 IPR030393 GO:0005525
Tsu07g00482 303 Gene3D - 91 299 IPR027417 -
Tsu07g00482 303 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 49 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00482 Tsu-Chr7 3760690 3763940 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00482 K03978 - gmx:100784426 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00482 07 3760690 3763940 Tsu07g00482 07 3760690 3763940 ECH