Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00475 ATGCGCCCACCGGTTATTCTCGAATCTACCACCACTACCACCTTTTCTTCATATTCTTCTTGTGATCGCAGACTCAACACTCTCGCTAAACACTTTATCGACGTTAacgatcaaaatcaaaatcaaatggcTTCTCAAAACATCTCTCCTTCTCCAACCGCTTCTTCCAATTCCGTCTTCGCTCATCTCGTTCGTGCTCCTGAAGATCCTATCCTCGGGGTAACTGTTGCTTACAACAAAGATCCAAGCCCAATTAAGCTCAACTTAGGTGTTGGTGCTTACCGAACTGAGGAAGGTAAACCCCTTGTATTGGATGTAGTGAGGCGAGTTGAACAACAACTGTTGAATGACGTGTCTCGCAACAAGGAGTATATTCCAATTGTTGGGCTCGctgattttaacaaattaagtGCTAAGCTTATTTTTGGTGCTGACAGCCCTGCAATTCAAGAGAATAGGGTTACCACTGTCCAAGGCTTATCTGGTACTGGTTCACTAAGAGTTGGAGGAGAATTCTTGGCTAAACACTACCACCAACGGATTATATACTTGCCACAACCTACTTGGGGAAATCATCCAAAGATTTTCACCTTGGCAGGTTTAACTGTCAAAACATATCGCTACTATGCTCCAGCAACACGAGGACTTGACTTTCAAGGACTTCTAGAGGATCTTGGTTCTGCCCCATCTGGATCTGTTGTTTTGCTGCATGCATGCGCACATAACCCTACTGGTGTTGATCCAACACTTGAACAATGGGAGCAGATTAGGCAGCTGATAAGATCCAAATCTTTGTTACCCTTCTTTGACAGTGCTTATCAGGGTTTTGCCAGTGGAAGTCTGGATGCAGATGCACAGCCTATTCGTTTGTTTGTTGCTGATGGTGGTGAGTTGCTGGCAGCCCAGAGTTATGCAAAGAACATGGGTCTTTATGGCGAACGTGTTGGTGCCTTGAGCATTGTCAGCAAGTCAGCTGATGTTGCAAGCTTGGTTGAGAGCCAGCTGAAACTTGTGATTAGGCCCATGTACTCAAGTCCTCCCATTCATGGTGCATCCATTGTGGCTGCCATTCTCAAGGATAGgaatttgttcaatGACTGGACTATTGAGTTGAAGGCAATGGCTGATCGCATTATCAGTATGCGCCAACAACTTTTCGATGCTTTACGCGCTAGAGGTACACCAGGTGATTGGAGTCACATTATCAAGCAGATTGGAATGTTTACTTTCACAGGATTGAATCCTGAGCAAGTTTCTTTCATGACTAAAGAGTATCATATATACTTGACATCTGATGGGAGGATTAGCATGGCTGGTTTGAGCTCCAAAACAGTCTCTCATCTGGCGGATGCAATACACGCAGCTGTAACCCGAGTTGCCTAA 1383 0.4353 MRPPVILESTTTTTFSSYSSCDRRLNTLAKHFIDVNDQNQNQMASQNISPSPTASSNSVFAHLVRAPEDPILGVTVAYNKDPSPIKLNLGVGAYRTEEGKPLVLDVVRRVEQQLLNDVSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHYHQRIIYLPQPTWGNHPKIFTLAGLTVKTYRYYAPATRGLDFQGLLEDLGSAPSGSVVLLHACAHNPTGVDPTLEQWEQIRQLIRSKSLLPFFDSAYQGFASGSLDADAQPIRLFVADGGELLAAQSYAKNMGLYGERVGALSIVSKSADVASLVESQLKLVIRPMYSSPPIHGASIVAAILKDRNLFNDWTIELKAMADRIISMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNPEQVSFMTKEYHIYLTSDGRISMAGLSSKTVSHLADAIHAAVTRVA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00475 460 PANTHER ASPARTATE AMINOTRANSFERASE 57 460 IPR000796 GO:0006520|GO:0008483
Tsu07g00475 460 CDD AAT_like 87 440 - -
Tsu07g00475 460 PRINTS Aspartate aminotransferase signature 401 419 IPR000796 GO:0006520|GO:0008483
Tsu07g00475 460 PRINTS Aspartate aminotransferase signature 265 277 IPR000796 GO:0006520|GO:0008483
Tsu07g00475 460 PRINTS Aspartate aminotransferase signature 333 358 IPR000796 GO:0006520|GO:0008483
Tsu07g00475 460 PRINTS Aspartate aminotransferase signature 234 253 IPR000796 GO:0006520|GO:0008483
Tsu07g00475 460 PANTHER ASPARTATE AMINOTRANSFERASE 57 460 - -
Tsu07g00475 460 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 303 316 IPR004838 GO:0003824|GO:0009058|GO:0030170
Tsu07g00475 460 Gene3D Aspartate Aminotransferase, domain 1 65 452 IPR015422 GO:0003824
Tsu07g00475 460 SUPERFAMILY PLP-dependent transferases 58 458 IPR015424 -
Tsu07g00475 460 Gene3D - 119 360 IPR015421 GO:0003824
Tsu07g00475 460 Pfam Aminotransferase class I and II 85 452 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00475 Tsu-Chr7 3682550 3686857 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00475 K14454 - gmx:547509 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00475 07 3682550 3686857 Tsu07g00475 07 3682550 3686857 ECH