Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00474 ATGGCAGATCACGATGAACAACGTCTTCAACCTCAAGAGCTAGGTTACGACCCCAACTTCGTCCCCGATTCAGTCAAATCATTCGTTGTTCATCTCTACCGTCAGATCAGAGATAAAAATGTATACGAGATCCACCAGATGTACGAAACTTCCTTCCAAACCCTATCGGAGCGTCATTTCAAAGACACTCCATGGCCTTCTGTCGACGCCATAGCTCAATACGTCGATAACGACCATGTGTTCTGTCTTCTTTACCGTGAGATGTGGTTTCGTCATCTCTATGCTCGTCTCACTCCTACTCTTCGTCAGAGAATCGATTCATGGGATAATTACTGTAGTCTCTTTCAGGTTGTTCTTCATGGTGTTGTTAATATGCAACTTCCGAATCAGTGGCTTTGGGATATGGTTGATGAATTTGTTTATCAGTTTCAAAGCTTTTGTCAGTATCGTGCTAAAATGAAGAACAAAACTGAACAAGAAATTGCTCTCTTGAGACAGTTTGACCAGGCTTGGAATGTTTTTGGTGTTCTGAACTTCTTGCAAGCACTTGTTGAGAAGTCAGCGATTATTCAGATACTTGAGCAAGAGAAGGAAGGAGGTCTTGAGCAATTCACTGCTAATGATGGCTATGATTACAATGGTGGTAGCAATGTCTTGAAGGTTTTGGGGTATTTCAGTATGGTTGGCTTGCTTAGGGTTCATTGTCTTTTGGGTGATTATCATACTGGTCTTAAGTGCTTGCAACCTATTGATATTAGTCAGCCAGGTGTTTACAACATTGTTATTGGATGCCACATTACCACCATTTACCACTATGGTTTTGCCAATCTTATGCTCCGCAGATATGTGGAAGCAATTCGTGAATTCAACAAAATTCTCTTGTACATCTTTAAGACAAAGGTGTACCATCAGAAATCTCCACAATATGAGCAGATATTGAAGAAGAATGAGCAGATGTATGCGTTGCTGGCAATTTCCCTCTCACTTTGCCCCCAAAGCAAGCTCGTTGATGAAACTGTGAACTCTCAGTTGCGAGAGAAGTATGGTGAAAAGATGAGCAGAATGCAACGATACGATGATGAGGCTTTTGCTATGTATGATGAGCTCTTCTCATATGCATGCCCCAAGTTTATCACCCCTTCAGCGCCCAGTTTTGAGGAGCCTCTAGTAAATTACAACCAGGATGCTTATAGACTTCAATTGAAACTGTTCCTTTATGAAGCAAAGCAACAACAGTTGTTATCAGGTCTCAGGACCTTCTTGAAAGTATATTCAACAATCTCCCTTGCAAAACTTGCAAGTTACATGGAAGTAGATGAACCGACCTTAAGGACTATCTTATTGACATACAAGCACAAGACCCATGCTGTTGATAGTGCTGGAAAAGTTATATCCAATGCTGATGTGAATTTCTTCATTGATGACGACACAATCCATGTTGTGGAGTCCAAACCTCCCAAACGGTATGGGGATTACTTCTTGCTTCAGGTTGCTAAGCTTGAAGGGGTGATCAACGAGATGGACAGTATAAAGCTGGATTGA 1542 0.415 MADHDEQRLQPQELGYDPNFVPDSVKSFVVHLYRQIRDKNVYEIHQMYETSFQTLSERHFKDTPWPSVDAIAQYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVFGVLNFLQALVEKSAIIQILEQEKEGGLEQFTANDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLQPIDISQPGVYNIVIGCHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKVYHQKSPQYEQILKKNEQMYALLAISLSLCPQSKLVDETVNSQLREKYGEKMSRMQRYDDEAFAMYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGLRTFLKVYSTISLAKLASYMEVDEPTLRTILLTYKHKTHAVDSAGKVISNADVNFFIDDDTIHVVESKPPKRYGDYFLLQVAKLEGVINEMDSIKLD 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00474 513 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 16 513 IPR019382 GO:0003743|GO:0005737|GO:0005852
Tsu07g00474 513 ProSiteProfiles PCI domain profile. 285 487 IPR000717 -
Tsu07g00474 513 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 10 502 IPR019382 GO:0003743|GO:0005737|GO:0005852
Tsu07g00474 513 Pfam RNA polymerase I-associated factor PAF67 103 499 IPR019382 GO:0003743|GO:0005737|GO:0005852
Tsu07g00474 513 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT L 16 513 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00474 K15029 - gmx:100804691 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00474 07 3677442 3681488 Tsu07g00474 07 3677442 3681488 ECH