Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00466 ATGGCCATGGCGATTAGGGTTTTTCTCTCCTTTCTACTTTTCCTCTCACTAACCAATCTCGCTTCTTCGCTTTACGAAGATCAAGTTGGCCTCATGGATTGGCACCAACAGTATATTGGGAAGGTAAAGCATGCTGTGTTCCATACTCAAAAGACCGGGCGGAAGCGTGTTTTAGTGTCCACTGAAGAGAATGTTGTGGCTTCACTCGACCTTCGCCATGGAGAGATTTTTTGGAGGCATGTTCTTGGCACCAATGACGTTGTTGATGGAATTGACATTGCCCTAGGAAAATATGTCATTACTCTTTCCTCTGGTGGGAGTATATTGAGAGCATGGAACTTACCTGATGGGCAGATGGTTTGGGAGTCTGCCCTTCAGGGATCAAAGGCATCAAAGTCAATATTAAACATTCCaAAAAATTTGAAATCTGACAAAGATGATACGATCCTTGTTTTTGGTAAAGGGTGTCTCCATGCCATTTCTAGCATAGACGGTGAAGTTCTCTGGAAGAAAGATTTTGCTGGTGAGAGCATTGAAGTTAGCCATATTATACAGTCTTCCGAAGTGATCTATGTAGCTGGTTTTGTTGGTTCTTCGAAGTTTTATGTGTATGAATTGGATGCCAAGAGTGGAGAGTTGTTAAAGAATAATCATATAGCACTTCCCTTTGAAACTTCTGGGGAATCATTATATGTCCCAGGTGATAAGTTTTTGGTATTGGATGATGCAAGGTCAAAGATAGTAACGATAAACATCAACAATGGAGATATTAACTACAACCAGAAGCAAATTTCAGACCTCATCAAGGATTCATCTGGGCAGGCAGTAATATTACCATCAAGGCTTCCAGGACTTTTCGCATTAAAAATCAATTCccaatttcttttaattaaagTGACAAATGAAGGTGAGTTGGTGGTCGTGGACAAAATTGATAATGCAGCAGCTTTTAGCAATGCTCTGTCAATTTCAGAGGATCAACATGTTTTTGCATTTGTTCAATATGAAGACAATAAAATTCACCTCTCAGTAAAAGATGTTAATGATTGGAGTCGTGATTTGCTAAAGGAAGACCTGGTAATAGACCATCAAAGAGGAAATATTGAGAAGATTTTCATAAACAATTATATCAGGACAGATAGATCTCATGGTTTCAGAGCATTGATGGTAATGGAGGATCATTCActtctattagttcaacaaGGAGAAATTGTCTGGAGTAGAGAGGATGGTCTTGCCTCAGTTGTTGATGTAACAACATCAGAACTACCTGTGGAAAAGGAAGGTGTATCTGTGGCAAAAGTAGAACAGAACCTATTCGAATGGCTTAAGGGACATGTGCTGAAACTCAAAGGAACTCTAATGATTGCAAGCCCTGAGGATAAAATAGCTATTCAAAAGCTTAGGATGGGGAGTTCTGAGAAAAGCAAAATGACTCGTGATCATAATGGTTTTCGTAAGTTGCTTATAGTACTTACAAGGGCTGGAAAGGTTTTTGCTTTGCATACCGGGGATGGACACATCGTTTGGTCTATTACGCTTAATACTCTGCGTAAATCAGAGGAGTGCGAACATCCAGTTGGGCTTAACATTTATCAGTGGCAGGTTCCGCATCATCATGCACTGGATGAGAATCCATCTATTCTTGTAATCGGGCGATGTGGACCAAGTTTGAGTGCACCAACTGCTCTTTCTTTCCTTGATGCATACACAGGGAAGGAAATCAATTCTTTGAGTCTTGCACACACTGTTGCTCGAGTTATTCCACTgccttatactgattcaactgaACAGCGTCTGCATCTTATTATAGACTTTAACAAACATGCATATTTATACCCAAGAACTCCTGAAGCTAGTGAGATTCTGAAACATGAGTTTTCAAATATATACTGGTACTCTGTTGAGGCCGATAATGGTGTTATTAGAGGTCATGCCTTGAAGAGCAATTGCATTCACGAAGTAGTGGATGAATACTGCTTTGTATTCAGGGACTTGTGGTCAATTGTATTCCCATCTGAATCAGAAAAGATTATTGCAACAGTGACAAGAAAATCAAATGAGGTATGCCTTTGGTTTTGa 2082 0.3895 MAMAIRVFLSFLLFLSLTNLASSLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVLVSTEENVVASLDLRHGEIFWRHVLGTNDVVDGIDIALGKYVITLSSGGSILRAWNLPDGQMVWESALQGSKASKSILNIPKNLKSDKDDTILVFGKGCLHAISSIDGEVLWKKDFAGESIEVSHIIQSSEVIYVAGFVGSSKFYVYELDAKSGELLKNNHIALPFETSGESLYVPGDKFLVLDDARSKIVTININNGDINYNQKQISDLIKDSSGQAVILPSRLPGLFALKINSQFLLIKVTNEGELVVVDKIDNAAAFSNALSISEDQHVFAFVQYEDNKIHLSVKDVNDWSRDLLKEDLVIDHQRGNIEKIFINNYIRTDRSHGFRALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKEGVSVAKVEQNLFEWLKGHVLKLKGTLMIASPEDKIAIQKLRMGSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGHIVWSITLNTLRKSEECEHPVGLNIYQWQVPHHHALDENPSILVIGRCGPSLSAPTALSFLDAYTGKEINSLSLAHTVARVIPLPYTDSTEQRLHLIIDFNKHAYLYPRTPEASEILKHEFSNIYWYSVEADNGVIRGHALKSNCIHEVVDEYCFVFRDLWSIVFPSESEKIIATVTRKSNEVCLWF 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00466 693 Gene3D - 43 345 IPR015943 GO:0005515
Tsu07g00466 693 Pfam PQQ-like domain 107 297 IPR002372 -
Tsu07g00466 693 SMART ire1_9 142 172 IPR018391 -
Tsu07g00466 693 SMART ire1_9 482 513 IPR018391 -
Tsu07g00466 693 PANTHER UNCHARACTERIZED 9 689 IPR026895 GO:0072546
Tsu07g00466 693 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 55 584 IPR011047 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00466 K23562 - gmx:100790095 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00466 07 3597663 3603183 Tsu07g00466 07 3597663 3603183 ECH