Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00465 ATGGCATCTATTAGAAGAACCTCGTCTCCAGTTGCTCGAGCCGGAAATGTAGCAAATCTTGAAGGCTTTTCAGTAGCTTCCCCTTTGTCTAAATCCTCATCAAGTCCTCAAAACTCACCTTCTTCGGTCCCATCATTGGACTCCCGTGCTTTTTTGCTCGGTGTTTTCTATCCGAGATCTTTGAGGGCTATTGAGAGATCAAATTCAAAGCCTAAGGGACAGCTTTGGAAGAAAGTGcttttccattttttcatttgtttcatgGTTGGTGTTTCTATTGGACTCATTCCGCTCGCATCAACTAACTTATCCTTGAATCTCATGTCAAAAGACTCACAACATCAAGATTTCTCTTTTGAGATAATATCTAGAGTTGGAAATTTACGGTCACTTGAAAATTTGAAGACAAATGAGACACCGTTAGTTGACGAGGATGTGAAGTTTGATGCTACTTTGATTTCAGAAGTGCAAGAACAGGAACTAACAAATGGTGTAACATATAATGCCTCGGATAGCCAATTCAGTGAAGATCTATATGTGGATTCTCAAAAGCTTCTCATAATTATCACACCGACTTACAATCGTCTATTTCAAGCATATTACTTGCATCACTTGTCACAAACTTTGAAATTGGTCTCATCTCCTTTGTTGTGGATTGTTATTGAGATGAATTCGCAATCTGATGAAACTGCTGACATCTTGAGGAGTAGTGGGATTATGTATAGGCATCTCGTCTGCAAAATGAATCTGACCAATACAAGCCATAGGAGCATTATTATGAGAAATGTTGCAATAGCTCACATTGAAACTCACCGCCTCAATGGAATTGTGTATTTTGCAGACGATAATAACATCTACTCGGTGGAACTCTTTCAGCAAATGAGAGATATAAGGCGATTTGGAACATGGACTGTTGCAAAACTATCGGAGGATAGAAGTGGCATTGTCTTGCAAGGGCCCATTTGTGATGGAAGTCAAGTGATTGGATGGCACACAAATAATAAATCAGATGGCAAATCTAAAAGATTTCACGCTGAAATGCCTGGTTTCGCCTTCAATAGCACGATACTTTGGGATCGGAAGAAGTGGCACCGACCCAATCCTGAACCTATCAGACAGCTCGAATCAGTCAAGGAAAATTTGTGGGTTAGCACGTTGATTGAGCAGATTGTTGAAGATGAAGGTGAAATGGAGGGTTTAATGAACGACTGCTCGAGAGTTATGGTTTGGCATATTGATCTTGAGTTGTCTTATTCTTTCTATCCTCGGAAATGGATTACAGAGAACAACCTAGATGCCATTTGGAATCTTCCACTTGCGTGA 1323 0.3961 MASIRRTSSPVARAGNVANLEGFSVASPLSKSSSSPQNSPSSVPSLDSRAFLLGVFYPRSLRAIERSNSKPKGQLWKKVLFHFFICFMVGVSIGLIPLASTNLSLNLMSKDSQHQDFSFEIISRVGNLRSLENLKTNETPLVDEDVKFDATLISEVQEQELTNGVTYNASDSQFSEDLYVDSQKLLIIITPTYNRLFQAYYLHHLSQTLKLVSSPLLWIVIEMNSQSDETADILRSSGIMYRHLVCKMNLTNTSHRSIIMRNVAIAHIETHRLNGIVYFADDNNIYSVELFQQMRDIRRFGTWTVAKLSEDRSGIVLQGPICDGSQVIGWHTNNKSDGKSKRFHAEMPGFAFNSTILWDRKKWHRPNPEPIRQLESVKENLWVSTLIEQIVEDEGEMEGLMNDCSRVMVWHIDLELSYSFYPRKWITENNLDAIWNLPLA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00465 440 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 185 429 IPR029044 -
Tsu07g00465 440 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 434 IPR005027 GO:0015018|GO:0016020
Tsu07g00465 440 CDD GlcAT-I 184 415 IPR005027 GO:0015018|GO:0016020
Tsu07g00465 440 Pfam Glycosyltransferase family 43 205 415 IPR005027 GO:0015018|GO:0016020
Tsu07g00465 440 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 1 434 - -
Tsu07g00465 440 SUPERFAMILY Nucleotide-diphospho-sugar transferases 185 431 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00465 Tsu-Chr7 3592093 3595518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00465 1 434 Glycosyltransferase AT1G27600 42.922 7.18e-117 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00465 K20869 - gmx:100808765 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00465 07 3592093 3595518 Tsu07g00465 07 3592093 3595518 ECH