Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00462 ATGGAGAAGGTAATAGAAGAACCTCTTCTAAGCCATGAGCATAACTTAAATGTCAATgtcaacaacaataacaacaaggGTGGTTTTAGAACATTACCTTTTATCATAGCTAATGAGGCATGTGAGAGAGTTGCAAGTATTGGATTAATGCCTAACATGATAATATATTTGACTAAAGTGTATAATATGGAAACTGCTGAAGCTACTAATTTTCTCTTGTTATGGTCTGCTGCCACCAATTTCACTCCTCTCATTGCTGCTTTCCTTGCTGATTCCTATTTTGGTCGATATCCTATGATCGCTTTTGGTTCCATTTCTAGCCTACTGGGAATGATTCTTCTATGGTTAACAACTATAATCCCACTATCAAGGCCAATTATGTGTAACCAACTCACAAAAAACTGCAACTCCCCTACAACAATCCATCTTTTGTTATTGCATTCTTCTTTTGCTCTCATGTCCATTGGAGCTGGAGGCATAAGATCCTCCTCTTTAGCCTTTGGTGTTGATCAATTAAGTAAACAGGACGAAAACGCGGGAATCAAAGAGGGCTACTTCAGCTGGTACTATGCTTCTGTCGCAGTGGCGTCGCTCTTAGGGTTAAGTGTTGTTGTCTATATTCAAGATAACTTGGGATGGACAGTAGGATTTGGTGTTCCTGTTGTCCTTATGTTTATAGCTACATTATCATTTTTCTTAGCTACTCCATTTTATGTAATGTTGGAAGCTAAGAAGAACATGCTAACTGGTTTAGCACAGGTTCTTGTAGCTTCTTACAGAAACAGACTTCTGCAGTTACCACAAGAGGATATGAATGTGATTGGTATTTACCATCATGAGAAGGATTCCAATCTCCTAGTACCAACTGAAAAATTAAGGTTTCTCAATAAAGCATGCATAATGAGAAATCCTTTAGAAGATCTAACACAAGATGGAAGAGCTTTAAATCCATGGAATCTTTGCACAATTGAACAAGTGGAAGATCTCAAGGCACTTTTTAAGATAGTACCAATTTGGACAACAGGAATCATGATGACTGTGAATGTGAGTCAAAGTTCTTTTCTTGTACTAGAAGCTTCCTCCATGGACCGCCACATCGGTTCAAATTTCCAAATTCCACCAGCCTCCTTTGGTACATTTATGATGTTATCATTAATTCTTTGGGTTATACTTTACGACCGATTTTTAGTCCCTTTGGCATCAAGGATTAAAGGGCGTGCGACAAGCTTAGGAGCGAAACAAAAAATGGGAGTTAGTCTATTTTCTTGTAGCATATCAATTGCATCACTTGCTATCGTAGAGAGTATTAGACGCAGAATCGCAATCGATCAAGGCTATTTAGAACAGCCGGAAGCTGTGGTGAATATGTCTGCATTGTGGCTATTGCCGCGCCAAATCATCGATGGATTGGCCGAGGCATCTGGTGTAGTAGGACAAACTGAATTTTTTCTCAATGAGTTACCTCAATCTATGTCTAGTATAGCTTCTACTCTTGGTGGACTTGGAATTTCTGTTGCAAGTTTGGTTGCAAGTTTTATTCTGAGTTCTGTTGATAGTGTTACTGGAAGGGGAGGGAATGAAAGTTGGATTTCAAGCAACATAAACAAGGGTCACTATGATTACTAttatagttttatttgtgttttgagCATTTTAAATTTTCTGTATTTTCTTTACTGTAGTAAATCTTATGGTCCTTGTAAGAATAGACagaaataa 1719 0.3717 MEKVIEEPLLSHEHNLNVNVNNNNNKGGFRTLPFIIANEACERVASIGLMPNMIIYLTKVYNMETAEATNFLLLWSAATNFTPLIAAFLADSYFGRYPMIAFGSISSLLGMILLWLTTIIPLSRPIMCNQLTKNCNSPTTIHLLLLHSSFALMSIGAGGIRSSSLAFGVDQLSKQDENAGIKEGYFSWYYASVAVASLLGLSVVVYIQDNLGWTVGFGVPVVLMFIATLSFFLATPFYVMLEAKKNMLTGLAQVLVASYRNRLLQLPQEDMNVIGIYHHEKDSNLLVPTEKLRFLNKACIMRNPLEDLTQDGRALNPWNLCTIEQVEDLKALFKIVPIWTTGIMMTVNVSQSSFLVLEASSMDRHIGSNFQIPPASFGTFMMLSLILWVILYDRFLVPLASRIKGRATSLGAKQKMGVSLFSCSISIASLAIVESIRRRIAIDQGYLEQPEAVVNMSALWLLPRQIIDGLAEASGVVGQTEFFLNELPQSMSSIASTLGGLGISVASLVASFILSSVDSVTGRGGNESWISSNINKGHYDYYYSFICVLSILNFLYFLYCSKSYGPCKNRQK 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00462 572 Pfam POT family 99 530 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu07g00462 572 CDD MFS_NPF1_2 32 564 - -
Tsu07g00462 572 Gene3D MFS general substrate transporter like domains 3 572 IPR036259 -
Tsu07g00462 572 PANTHER PROTEIN NRT1/ PTR FAMILY 1.3 25 565 - -
Tsu07g00462 572 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 25 565 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu07g00462 572 SUPERFAMILY MFS general substrate transporter 46 561 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00462 Tsu-Chr7 3570208 3572736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00462 21 572 Organic Solute Cotransporters AT1G52190 53.131 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00462 K14638 - gmx:100809846 861.677