Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00459 ATGTTAGTGAACTCCAGCACCTCTGTCTCTAAATGCTCAGTTCATCAGCTCGATAATATAGACGAGAATGTTCCTGCATCATCTTGCGCACATCCTGAAACCCCAACAAAATCTATGGAGTTCCTTGCTAGATCTTGGAGTCTTTCTGCCACAGAACTCTCCAAAGCACTGCATAGCACCAATACTACGACATCCACGGCCATTGAGATGCAACTCTTATGCTCTTCTGACCAGTTTTATACCAAAGGTTTCACTGCCTCTAAGGATTCTCAGTTATCGACCGGGCGTTGTCCGCAGATTTTGCCAAAAGAAAGTGGCGAAACAAAGGAGCTTGATAAGAGGAAGGACAACAGCCGTTGCGGCTTCAATAGCATCATCCGGAATGCCTACAAAAAGAACCCTACCATGACTTCTGCTGCAGTTGCATCTGCAGCAGCTCTAGTAGCTTCTCACTGCATTGAGATTGCAGTAGATATGGGAGCTGAACAGGATCAAATTGTAACAGCAGTTGACTCTGCTATTACTGCAAAAACCAATGGAGATATTACGACTCTAACAGCTGGAGCAGCCACAGATATAGTCACTGGAGTGTGCAGCGATATCCCCGCTTGGCCAGGAAGGGAGAAGGAAGACATTGGCGAACAAAGAGCATATTTTGGAATAAAAGCAGAAGACAGATTAATAGAATTTGAATGTGGAAGTAAAGGAGACAAACTATTCTGGTTAGAGGGAATCCAGTACATGTTGAATTGCAGTGCCAAAGTAACATACTAA 774 0.4419 MLVNSSTSVSKCSVHQLDNIDENVPASSCAHPETPTKSMEFLARSWSLSATELSKALHSTNTTTSTAIEMQLLCSSDQFYTKGFTASKDSQLSTGRCPQILPKESGETKELDKRKDNSRCGFNSIIRNAYKKNPTMTSAAVASAAALVASHCIEIAVDMGAEQDQIVTAVDSAITAKTNGDITTLTAGAATDIVTGVCSDIPAWPGREKEDIGEQRAYFGIKAEDRLIEFECGSKGDKLFWLEGIQYMLNCSAKVTY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00459 257 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 193 254 - -
Tsu07g00459 257 PANTHER EXPRESSED PROTEIN 10 117 IPR040269 -
Tsu07g00459 257 PANTHER EXPRESSED PROTEIN 129 191 IPR040269 -
Tsu07g00459 257 PANTHER EXPRESSED PROTEIN 193 254 IPR040269 -
Tsu07g00459 257 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 129 191 - -
Tsu07g00459 257 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 10 117 - -
Tsu07g00459 257 Pfam Auxin canalisation 131 191 IPR008546 -
Tsu07g00459 257 Pfam Auxin canalisation 32 86 IPR008546 -
Tsu07g00459 257 Pfam Plant pleckstrin homology-like region 190 252 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00459 Tsu-Chr7 3533750 3536453 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00459 - - mtr:MTR_3g110182 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00459 07 3533750 3536453 Tsu07g00459 07 3533750 3536453 ECH