Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00455 ATGGCCatttcatataataataatgcatTTATTGTTAATTGCTGCATTCAGAAAAGACCTTCCTATGTCTCAGATAATTCTCATCACCACAACAATACTCCACTCTTCTCTATTGTTAAGCCAAACAAGAAATCAAGTCTACCTCAAGTTTCATTGCAAATTGATGTTCCAAAAACTATGAAAAATGCTGTAGCTAAATTAATTGACGTTTTTGTTGATTCATTCTTTGAGTTCATTGACAAGCCTTTGCTTCCATCTAAGAGTAACTTTGCTCCCGTGGAAGAGTTGGGGGAAGCCATACTTGTTTCTTGCATTCAAGGACGAATTCCTAGTGATTTTCCAGAGGGTGTCTACATTAGAAATGGACCAAATCCACTTTTTGGAGGACtaaaatcaacaaattcaatatttggTAAGTCAAGTCACATTTGGGTTGAAGGAGAAGGAATGCTTCATGCATTGTATTTTCAAAAATCAAGTAATGGAAGCTGGAAAATCCACTACAACAATAAGCATGTTGAAACAGAAACATACAACCttgaaaaacaaagaaacaaaccaTTGTTTCTACCTGCCATAGAAGGCAATTCAATGGCCATTTTGTCGGCTTATTTCTTCAACTGGTTGAGATCTGGCAAAGTAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCGGGGAAGTTTTACTCAATTGCTGAAAGTCACATGCCACAAGAGATTGATATTTTGTCCttgaaaactttaaaaaattgggACCTCAGTGCAAATTGGAATAGACCCTTTACAAGCCATCCAAAGAAAGCTCCAATTACTGGGGAGCTAGTTACATTAGGTGTGGAACCAATTAAACCTTTTGTTGTGGTTGGAATTATTTCTGCTGATGGAAAAAAGTTGGTTCATAAAGTTGATGTCAAACTAAATAGGTGTAGTCTTTGCCATGACATAGGTGTTACACAAAGGTACAATGTGATCATGGATTTTCCACTAACCATTGATCTAAACAGACTTCTAAGAGGAGGCCAATTAATAAAGTATGacaaaaaagaatatgcaaGGATTGGGGTAATGCCGCGCTATGGTGATGCTAACTCGGTCAAATGGTTTGAAGTGGAACCTAATTGTACCTTTCACATTATCAATTCTTTTGAAGATGGAAATGAGGCAAGTTATTATCCTAAAGTTGTAGTGAGGGGCTGCAGATCTCTTGACTCTTTAATTCCCGAACCGGACCCGAGTTCAAATGAATTTGACTGGTTATCTCGTTGTTACGAATGGCGATTGAATATGCAAACCGGAGAGGTTAAGGAGAAAGATCCTTGTGGTGACAAAGTAGTTTATATGGATTTTCCTATGATCAATGAAAAATATGTTGGTGTTAAGCATAGATATGCATACACACAAATAGTTGATCCTATTGCAAGCTCAACAACTCAAGATGTACCAAAATATAGAGGTTTAGCTAAACTATACTTTGAAGAATCATGTGAAGAATTATCGATGTCAAAGagagaaaaagatgaagcTATAAGGATGGAATATCATATGTTTGAGAAGAATACATTTTGCAATGGGGCTGCTTTTGTTGCTAGAGATGAAGGTcttgaagaagatgatggtTGGATCATTACTTTTGTTCACAATGAAGATACTAACACATCTCAAGTTGATATAATTGACACAAAGAATTTTTCTAGTGAGACTGTTGCCAAAATTGAAATCCCTTGTAGAGTTCCATATGGATTTCATGGAGCTTTCATGCCAATCTCATTCCAAGATCAATAG 1788 0.3412 MAISYNNNAFIVNCCIQKRPSYVSDNSHHHNNTPLFSIVKPNKKSSLPQVSLQIDVPKTMKNAVAKLIDVFVDSFFEFIDKPLLPSKSNFAPVEELGEAILVSCIQGRIPSDFPEGVYIRNGPNPLFGGLKSTNSIFGKSSHIWVEGEGMLHALYFQKSSNGSWKIHYNNKHVETETYNLEKQRNKPLFLPAIEGNSMAILSAYFFNWLRSGKVNKYISNTNVFEHSGKFYSIAESHMPQEIDILSLKTLKNWDLSANWNRPFTSHPKKAPITGELVTLGVEPIKPFVVVGIISADGKKLVHKVDVKLNRCSLCHDIGVTQRYNVIMDFPLTIDLNRLLRGGQLIKYDKKEYARIGVMPRYGDANSVKWFEVEPNCTFHIINSFEDGNEASYYPKVVVRGCRSLDSLIPEPDPSSNEFDWLSRCYEWRLNMQTGEVKEKDPCGDKVVYMDFPMINEKYVGVKHRYAYTQIVDPIASSTTQDVPKYRGLAKLYFEESCEELSMSKREKDEAIRMEYHMFEKNTFCNGAAFVARDEGLEEDDGWIITFVHNEDTNTSQVDIIDTKNFSSETVAKIEIPCRVPYGFHGAFMPISFQDQ 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00455 595 PANTHER BETA-CAROTENE DIOXYGENASE 36 590 IPR004294 GO:0016702
Tsu07g00455 595 Pfam Retinal pigment epithelial membrane protein 91 589 IPR004294 GO:0016702
Tsu07g00455 595 PANTHER OS06G0162550 PROTEIN 36 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00455 Tsu-Chr7 3510761 3523191 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00455 - - gmx:100817738 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00455 07 3510761 3523191 Tsu07g00455 07 3510761 3523191 ECH