Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00447 ATGGCTTTCACAGCCTCACCATCCATAATAAGAAACTCCATTTCATGGAAAAATATGATTGTTTGTGATATGGTTGATAACACTTGTAGGGACAAGTTTTCATTTCGAAACAAGGGCATCAATAAAGGCCAACACAATCTTCGAGATCGTTTGGCCGTTGCAAATGTTGTGAGTCCATCGCGTGTGATTTCCCCACCTCCACCACCGGAGAAGCGTTCGGGGACCACCGATGGTCACCAACACCACGTTGCATGGACTAGTGTCCCCCAAGAGAGATGGGAAGGAGAATTGCTTGTTGAAGGAGATATTCCACTCTGGCTGAAAGGAACGTATATAAGAAATGGTCCGGGCATGTGGAACATCGGGGACTACAACTTCAGGCATCTCTTTGACGGATACGCCACCTTGGTAGGACTTCACTTCGAGAATGGAAGGTTAACTGCCGGTCACCGGCAAATCGAATCTCAAGCCTATCAAGCAGCAAGGAAAAATCAGAAGATATGTTATCGTGAATTTTCTGAAGTGCCTAAGGCTGAAAATTTCTTGGCCTATGTAGGGGAGCTAGCAAGCCTTTTCTCCGGTGCTTCGCTTACCGACAATGCCAACACTGGCGTGGTGAAGCTCGGCGATGGTAGGGTGGTTTGTTTGACGGAGACACAAAAAGGGTCCATAGTGATAGACCCTGACACATTGGAGACAATTGGGAAATTTGAGTACAGTGATTCTTTGGGGGGTCTCATTCACTCTGCACACCCCATTGTGACGGATAAGGAGTTTTTAACGTTAATCCCTGACCTTTTGAAACCGGGATACTTGGTGGTAAAGATGGAACCTGGCTCCAATGAGAGGAATGTCATTGGGCGAGTTGATTGTCGGAGCGGATCATCACCCGGTTGGGTACACTCCTTCCCCGTTACTGAACACTATGTTGTTGTGCCTGAAATGCCATTGAGGTATAGTGCTCAGAATTTGCTCAGGGCTGAACCAACTCCTTTATACAAATTTCAGTGGCAACCTGAGTCCAAAGCTTTTATGCATGTTATGTGCAAGACTAGTGGAAAGATTGTGGCAAGTGTGGAAGTGCCTTTGTTTGTTACTTTCCATTTCATAAATGCGTatgaagaggaagatgaagatggGAGGGTGATTGCTGTCATTGCTGACTGTTGTGAGCACAATTCAAACCCTGAGATTCTTGACAAGCTTAAATTACAGAACCTTCGCTCATTCAATGGCAAAGATGTTCTACCAGATGCAAGGGTTGGTCGGTTTAGAATACCACTAGATGGAAGTCCGTATGGAACATTAGAAGCAGCATTAGACCCAAATGAACATGGGAGAGGCATGGACATGTGCAGCATAAACCCTAATTATTTGGGGATGAAATACAAATATGCATATGCTTGTGGAGCGCAACGCCCTTGTAACTTCCCCAACACCCTCACCAAGATTGATTTAGAAATGAAAAGGGCCAAGAACTGGCATGAAGAAGGTGTTGTGGCCTCAGAACCACTCTTTGTACCTCGACCAGGAGCAACAGAGGAAGATGATGGTGTGGTGATTTCCATAGTCAGTGAGAAAAATGGAGAAGGATATGCGTTGGTGTTAGATGGTTCCACTTTTGAAGAGGTTGCTAGGGCTAAGTTCCCTTACGGACTTCCATATGGGTTGCATGGATGCTGGGTTCCAAAACAGTAA 1698 0.4505 MAFTASPSIIRNSISWKNMIVCDMVDNTCRDKFSFRNKGINKGQHNLRDRLAVANVVSPSRVISPPPPPEKRSGTTDGHQHHVAWTSVPQERWEGELLVEGDIPLWLKGTYIRNGPGMWNIGDYNFRHLFDGYATLVGLHFENGRLTAGHRQIESQAYQAARKNQKICYREFSEVPKAENFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTLETIGKFEYSDSLGGLIHSAHPIVTDKEFLTLIPDLLKPGYLVVKMEPGSNERNVIGRVDCRSGSSPGWVHSFPVTEHYVVVPEMPLRYSAQNLLRAEPTPLYKFQWQPESKAFMHVMCKTSGKIVASVEVPLFVTFHFINAYEEEDEDGRVIAVIADCCEHNSNPEILDKLKLQNLRSFNGKDVLPDARVGRFRIPLDGSPYGTLEAALDPNEHGRGMDMCSINPNYLGMKYKYAYACGAQRPCNFPNTLTKIDLEMKRAKNWHEEGVVASEPLFVPRPGATEEDDGVVISIVSEKNGEGYALVLDGSTFEEVARAKFPYGLPYGLHGCWVPKQ 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00447 565 MobiDBLite consensus disorder prediction 59 82 - -
Tsu07g00447 565 Pfam Retinal pigment epithelial membrane protein 90 563 IPR004294 GO:0016702
Tsu07g00447 565 PANTHER BETA-CAROTENE DIOXYGENASE 80 564 IPR004294 GO:0016702
Tsu07g00447 565 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 80 564 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00447 K17913 - gmx:100814148 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00447 07 3423471 3427218 Tsu07g00447 07 3423471 3427218 ECH