Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00429 ATGAAACAAGAAACAGAAACAGAGTCCTTATGTTTACCAAACAATGTTACAGTTACAGATATTACTTGCATGGAAAATCAACCAACGGTTATGATTGAGAAAGTAACCAAAACGGTGCGTTTAATAGGTTTTCTGATACAAAACGGTGTATCTAAGAGTAACAGAGTTATGCAAGATATTCAAGAAGTTATGAAAAGAGGAAAAACCATAGGAAAAACATTGAACAATGTGATGGTGAAACATCACGAAGCACTCACGTGTCGTCCACGTGATGCAGATATGTATTTCGTTTCACCGTTGGAGTATCAGTTCAGTTGTAGTAGTAGTCCACCGCGGTTGTCACGTGCTGTTAGTAGTAGGAGGAAGCTGTTATCTCCGGCGAAAGAGAATGGTCGTCGGAGAAAGCAAGTGAAAGTGTGTAATGAAGGGAGGCGCGTGAAGATTACGACGGTGGAAATAGAGGAGAAGGAGTTTCATGTTGATAAAGCGGCGGAGGAGTTTATTGATAGGTTTTACAGAGAACTAAGGTTGCAGAAATGGTTGGATCATCAATATTGCTGA 561 0.4029 MKQETETESLCLPNNVTVTDITCMENQPTVMIEKVTKTVRLIGFLIQNGVSKSNRVMQDIQEVMKRGKTIGKTLNNVMVKHHEALTCRPRDADMYFVSPLEYQFSCSSSPPRLSRAVSSRRKLLSPAKENGRRRKQVKVCNEGRRVKITTVEIEEKEFHVDKAAEEFIDRFYRELRLQKWLDHQYC 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00429 186 Pfam Cotton fibre expressed protein 160 179 IPR008480 -
Tsu07g00429 186 PANTHER DUF761 DOMAIN PROTEIN 24 184 - -
Tsu07g00429 186 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 24 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00429 Tsu-Chr7 3302471 3303031 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00429 - - mtr:MTR_3g109920 278.1