Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00419 ATGGAGGTTGAAAAGGATGTGTCTATGAAACAATACTCAAGTGATGAAGTGGATGATGATGGAAGAATCAAAAGAACTGGGAATGTGGTGACCGCAACAACACACATAATAACAGTGGTAGTTGGTGCAGGAGTGTTAGCTCTAGCATGGGCAATTGCTCAACTAGGATGGCTAGCTGGCATATCTGTTATGATCATCTTTTCATCCATTTCCATTTACACTTACAATCTTATAGCTGATTGTTATAGATATCCAGATTCTGTTAATGGCAAAAGAAACTACACTTATATGCAAGCTGTCCATTCATATCTAGgtGGAAAAATGTATGTGTTTTGTGGATTGGTCCAGTATGGGAAGCTTGCAGGTATTACAGTGGGATATACTATAACTTCCTCTACAAGCATGGTCGCTATAAAGAAATTGATTTGCTTTCACAAAAAAGGCCATGGAGCTTATTGCAAGTTTTCAAATAATCCCTATATGATTGGCTTTGGGATTGTTCAGATTTTGTTGTCTCAAATCCCAAATTTCCATAAGTTGACATTGCTATCAACTGTTGCTGCTATTACTTCTTTTGGTTATGCATTAATTGGAAGTGGGCTCTCTCTAGCTGTTGTGGTCTCAGGAAAAGGAGAAACAACACATTTGTTTGGAACCAAACTAGGGCCAGAATTATCAGGAGAAGACAAAATTTGGAGGGTTTTGAGTGCTTTGGGAAACATTGCACTTGCTTGCTCTTATGCTACTGTTGTCTATGATATAATGGACACATTAAAGTCATATCCATCAGAAAGAATACAGATGAGAAAAGCAAATGTGTTGGGGATCACAACAATGACAATACTTTTCCTTCTATGTGGTTCTCTTGGTTATGCAGCATTTGGTGATCACACACCAGGAAACATCCTCACTGGCTTTGGATTTTATGAGCCCTTCTGGTTGGTCGCATTAGGGAATGTTTGCATTATAATCCATATGGTCGGAGCATTTCAGGTGTTAGCCCAACCGATATTTCGGATAGTTGAGATGGGTGCTAACATGAAGTGGCCACGCTCAACTTTCATAAATAGCGAACGCAAAAACAAAATTGGCTCTTTAACATTCAACATCAACTTATTTAGGCTCATTTGGAGGACAATATTTGTGATAATGGCCACGATTATTGCCATGGCAATGCCATTCTTCAACGAGTTTCTAGCCTTACTTGGAGCATTTGGATTTTGGCCACTCATCATCTTTTTTCCAGTACAAATGCACATCTCTCAAAAACAGATAAACAGATTTTCACTCAAGTGGTGTGTGCTTCAACTATTGAGTTTTGTGTGTTTTCTTATTTCAGTAGCTGCTGCAGTTGGTGCCATTCATGGGATTAGTGGAACAATGCATGTGTTTTGTGGATTGGTCCAGTATGGGAAACTTGCAGGTATTACAGTGGGATATACTATAACTTCATCTACAAGCATGGTTGCTATAAAGAAATTGATTTGCTTTCACAAAAATGGTCATGGAGCTTATTGCAAGTTTTCAAATAATCCCTATATGATTGGCTTTGGGATTGTTCAGATTTTATTGTCTCAAATCCCAAATTTCCATAAGTTGACATTGCTATCAACTGTTGCTGCTATTACTTCTTTTGGTTATGCATTAATTGGAAGTGGGCTCTCTCTAGCTGTTGTGTTCTCAGGAAAAGGAGAAACAACACATTTGTTTGGAACCAAAGTAGGGCCAGAATTATCAGGAGAAGACAAAATTTGGAGGGTTTTGAGTGCTTTGGGAAACATTGCACTTGCTTGCTCTTATGCTACTGTTGTCTATGATATAATGGACACATTAAAGTCATATCCATCAGAAAGAATACAGATGAGAAAAGCAAATGTGTTGGGGATCACAACAATGACAATACTTTTCCTTCTATGTGGTTCTCTTGGTTATGCAGCATTTGGTGATCACACACCAGGAAACATTCTCACTGGCTTTGGATTTTATGAGCCCTTCTGGTTGGTCGCATTAGGGAATGTTTGCATTATAATCCATATGGTCGGAGCATTTCAGGTGTTAGCTCAACCGATATTTCGGATAGTTGAGATGGGTGCTAACATGAAGTGGCCACAGTCAGCTTTCATAAATAGCGAACGCAAAAACAAAATTGGCTTCTTGACAATCAACATCAACTTGTTTAGGCTCATTTGGAGGACAATATTTGTGATAATGGCGACGATTATTGCCATGGCAATGCCATTCTTCAACGAGTTTCTAGCCTTACTTGGAGCATTTGGATTTTGGCCACTAATCACCTTTTTTCCAGTACAAATGCACTTCTCTCAGAAACAGATAAACAGATTTTCACTCAAGTGGTGTGTGCTCCAACTATTGAGTTTTGTGTGTTTTCTTATTTCAGTAGCTGCTGCAGTTGGTGTCATTCATGGGATTAGTAAGAATATCAACAAATACAAACTCTTTAGGTATAAACAATAG 2475 0.3851 MEVEKDVSMKQYSSDEVDDDGRIKRTGNVVTATTHIITVVVGAGVLALAWAIAQLGWLAGISVMIIFSSISIYTYNLIADCYRYPDSVNGKRNYTYMQAVHSYLGGKMYVFCGLVQYGKLAGITVGYTITSSTSMVAIKKLICFHKKGHGAYCKFSNNPYMIGFGIVQILLSQIPNFHKLTLLSTVAAITSFGYALIGSGLSLAVVVSGKGETTHLFGTKLGPELSGEDKIWRVLSALGNIALACSYATVVYDIMDTLKSYPSERIQMRKANVLGITTMTILFLLCGSLGYAAFGDHTPGNILTGFGFYEPFWLVALGNVCIIIHMVGAFQVLAQPIFRIVEMGANMKWPRSTFINSERKNKIGSLTFNINLFRLIWRTIFVIMATIIAMAMPFFNEFLALLGAFGFWPLIIFFPVQMHISQKQINRFSLKWCVLQLLSFVCFLISVAAAVGAIHGISGTMHVFCGLVQYGKLAGITVGYTITSSTSMVAIKKLICFHKNGHGAYCKFSNNPYMIGFGIVQILLSQIPNFHKLTLLSTVAAITSFGYALIGSGLSLAVVFSGKGETTHLFGTKVGPELSGEDKIWRVLSALGNIALACSYATVVYDIMDTLKSYPSERIQMRKANVLGITTMTILFLLCGSLGYAAFGDHTPGNILTGFGFYEPFWLVALGNVCIIIHMVGAFQVLAQPIFRIVEMGANMKWPQSAFINSERKNKIGFLTININLFRLIWRTIFVIMATIIAMAMPFFNEFLALLGAFGFWPLITFFPVQMHFSQKQINRFSLKWCVLQLLSFVCFLISVAAAVGVIHGISKNINKYKLFRYKQ 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00419 824 PANTHER OS05G0424000 PROTEIN-RELATED 2 458 - -
Tsu07g00419 824 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 459 819 - -
Tsu07g00419 824 Pfam Transmembrane amino acid transporter protein 457 809 IPR013057 -
Tsu07g00419 824 Pfam Transmembrane amino acid transporter protein 26 456 IPR013057 -
Tsu07g00419 824 PANTHER OS05G0424000 PROTEIN-RELATED 459 819 - -
Tsu07g00419 824 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 2 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00419 Tsu-Chr7 3224370 3231888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00419 464 821 Organic Solute Cotransporters AT1G10010 50.418 1.32e-133 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00419 K24917 - gmx:100802090 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00419 07 3224370 3231888 Tsu07g00419 07 3224370 3231888 ECH