Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00418 ATGAAAGAGGTGATGGCAGTTGAAGTGGAATCCGGTGTTACAACTCCAAGTGCTCTTCTTGATGATGATGGGAGACCCAAAAGAACTGGGACTGTATGGAGTGCAAGCGCACATATCATAAACGCAGTTATTGGAACTGGAGTACTCTCCTTACCATGGGCTATGTCCCAAATGGGTTGGGCCCTTGGAATATCCTGCATTTTCACATTTGCTGGTATTACACTCTACACATCAAATCTTTTAGCTGATTGTTATAGATCACCAGATCCTGTTACTGGCAAGAGAAACACCACCTATATGGATGCTGTCAAAGCTCACTTGGGTGGTAAACAACATGTCTTTTGTGGATTGCTCCAGTATAGCAATCTTGCTGGCTTTACAATTGGCTTCATCATAACTACATCTACAAGTGTCGTgaCAATACGTAAAAACAATTGCTTCCGCAAGAATGGACTTGATGCTCCATGCCAATTCTCCAATAACCCATACATGATTTGTATTGGAATAATTGAAATAATACTATCTCAAATCCCAAATTTTCACAAGCTATCTGTACTCTCGATCATAGCAGCTTGCATGGCTTTTGGCTACGCATCCATTGGTGTTGGACTTTCTCTTGCAACCGTTGTCCAAGGAAATGTAAAGAACACATCATTTTCTGAAAGCCACAAGGGACGTAGTACAGCAGATATAGCATGGAGTATGCTAGTTGCAATTGGAGACATTGCACTTGCAAGTGCCTACGCTCAAATTGCAGTAGATATACAAGATAGTTTGAAGTCATCACCTCCAGAAAATAAAGTGATGAAGAGGGCTAATATGATTGGTATATCTACTATGACAGTTTTCTTTACCATGAGTGCATGTTTTGGATATGCTGCATTTGGTTCAAACACTCCTGGTAATATACTCATGAGCTCTGGCTTTCACAAACCTTTCTGGCTATTGGAATTGGCCAATGTCTTCATCATTGCTCACCTGTTGGGAGCATTTCAGGTTTTAATCCAACCTTTATTTCGTATAGTTGAAATATTGGCAGCAGAAAAGTGGCCAAACTCAAGTTTCGTGACAAGGGAAATTCCTATGAACATTGGCAAATTAAAATACACCATCAATTACTTTAGGTTAATTTGGAGGACAATATTTATTGTGGTGGTAACTCTATTAGCTATGGCAATGCCCTTTTTCAATGACATGATTGCCCTTCTTGGAGCTGTTGGATTTTGGCCTTCAGTGGTGTATTTTCCAGTAGAGATGTACATTGTGAAACAGAATATCAGAAAAGGAACAATGCGTTGGTTGGGGCTTCAAATATTGAGCTTATTCTGTTTGATTGTGTCTTTGGCTGCAGCAATTGGAGCTATTCATGGATTGGGTCAAGCTGTTGGGAAATATAAACCCTTCATGTATAAGGCATAG 1419 0.3996 MKEVMAVEVESGVTTPSALLDDDGRPKRTGTVWSASAHIINAVIGTGVLSLPWAMSQMGWALGISCIFTFAGITLYTSNLLADCYRSPDPVTGKRNTTYMDAVKAHLGGKQHVFCGLLQYSNLAGFTIGFIITTSTSVVTIRKNNCFRKNGLDAPCQFSNNPYMICIGIIEIILSQIPNFHKLSVLSIIAACMAFGYASIGVGLSLATVVQGNVKNTSFSESHKGRSTADIAWSMLVAIGDIALASAYAQIAVDIQDSLKSSPPENKVMKRANMIGISTMTVFFTMSACFGYAAFGSNTPGNILMSSGFHKPFWLLELANVFIIAHLLGAFQVLIQPLFRIVEILAAEKWPNSSFVTREIPMNIGKLKYTINYFRLIWRTIFIVVVTLLAMAMPFFNDMIALLGAVGFWPSVVYFPVEMYIVKQNIRKGTMRWLGLQILSLFCLIVSLAAAIGAIHGLGQAVGKYKPFMYKA 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00418 472 Pfam Transmembrane amino acid transporter protein 28 456 IPR013057 -
Tsu07g00418 472 PANTHER OS05G0424000 PROTEIN-RELATED 8 463 - -
Tsu07g00418 472 PANTHER ACID TRANSPORTER, PUTATIVE-RELATED 8 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00418 Tsu-Chr7 3215375 3220590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00418 9 468 Organic Solute Cotransporters AT1G10010 53.132 1.63e-180 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00418 K24917 - gmx:100804643 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00418 07 3215375 3220590 Tsu07g00418 07 3215375 3220590 ECH