Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00406 atgagtgattctgTGATGAAGGTATATGGAGCTCTACGCATGACTGTAAAAATGTTCTTGATGTGGAACTCACAAATGTTCATAGATGGCGGGGAAGATATAACTGTTGCAACTTCTTTGCTTGAGGCTAGTAATTTGATTGTTCTTAGGGGGGCTTCTGTGATACATTCTAATGCAAACCTTGGAGTTCACGGACAAGGTTTACTTAATTTATCAGGCCCAGGAGATTGGATTGAAGCTCAGCGTTTGGTTTTATCCCTATTTTATAGTATTCATGTTGGGCCTGGATCTGTTTTACGCGGTCCATTGGAGAATGCAACGACTAATAATGTTACTCCAAAACTTTACTGTGACAACAAAGATTGCCCGTATGAATTGCTTCACCCTCCCGAAGATTGCAATGTGAACACATCCTTGTCATTCACTCTTCAGATCTGCCGTGTTGAGGATGTCCTTGTCGAAGGCCTCATAAAAGGCTCTGTTGTTCATTTTCATAGGGCAAGGACGATAAGTATTGAATCTTCTGGAACAATATCTGCCACTGGAATGGGTTGTACTGGTGGTCTGGGTGGTGGAAATATTCTAAGTAATGGTATTGGCAGTGGTGGTGGGCATGGTGGTAAAGGTGGGAAGGCATGTTACAATGACTATTGTGTTGAGGGTGGCATCTCATATGGGACTCCAGACCTGCCCTGTGAACTTGGTAGTGGAAGTGGAAATGGCAACTCAACTGGTACCACAGCTGGGGGTGGAATCATAGTAATTGGATCACTAGAACACCCGTTGTCAAGTTTGTTAATCAAAGGTTCTGTACATGCTGACGGAGAGAATTTTGATCCAGCAATTAGAAGggaaaaatttgtaattttcgATAATTTTACCGGAGGCCCTGGAGGTGGATCTGGTGGCACTATATTATTGTTTCTCCATACCCTTGCCATTGGTAAATCAGCTATTCTTTCTAGTATTGGGGGATATAGCGGTATTAGTGGGGGTGGTGGTGGAGGCGGCGGAAGAATTCATTTTCATTGGTCTGACATTCCCACTGGAGATGTTTATCAGCCCATTGCTATTGTGAAGGGAGACATTCAATCTGGGGGAGGAAAGGGTAAAGGCTTGGGTGGCTCTGGAGAAAATGGGACGATATCTGGGAAGGCTTGCCCCAAAGGGCTCTACGGTACATTTTGTGAGGAATGTCCCGCAGGCACTTACAAGAATGTTACTGGATCTGATAGATCACTTTGTCAAGTTTGTCCTGTTCACGAGCTTCCTCATCGTGCTGTTTATATTTCAGTCCGAGGTGGTATTACCGAAGCCCCTTGCCCTTACCAATGCATTTCAGACCGATATCACATGCCAGACTGTTATACAGCTCTTGAAGAGTTAATTTATACATTTGGCGGACCTTGGTTATTTGGTCTTTTACTTACGAGTCTCCTGATCCTGTTAGCTTTGGTGCTCAGTGTCGCAAGGATGAAATTTGTTGGTGTTGATGAATTACCAGGTCCAGTACCCCCCCAACATTCTCAAATTGATCATTCCTTCCCTTTCCTGGAATCACTAAATGAGGTCTTAGAGACAAACAGAGTTGAGGAGTCCCAGAGTCATGTTCATAGAATGTACTTTATCGGACCTAATACTTTCAGTGAACCCTGGCAGCTGCCACATACACCTTCGGAACAAATTCATGATATTGTTTATGAGCGTGCATTCAATACATTTGTGGTTGAGATAAATGCTATAGCAGCTTATCAATGGTGGGAGGGAGCAATACATAGTGCTCTTTCTGTTATTGGATATCCACTTGCGTGGTCATGGCAACAATGCCGTAGGAGATTGAAGTTGCAACGGTTGCGCGAGTTTGTTCGATCAGAGTATGATCATGCTTGCCTTCGTTCTTGCCGATCACGAGCTCTCTATGAAGGGATTAAGGTAAATGCAACTTCTGACTTGATGCTTGCATATGTGGACTTTTTTCTTGGCGGGGATGAAAAGAGAACAGACCTGCCTCCTCAATTACATGAAAGGTTCCCAATGACATTGCTTTTCGGTGGTGATGGAAGTTATATGGCTCCATTTACCCTGCACAATGATAATATCCTTACCAGCCTCATGAGTcagTCAGTTCAGCCTACGACATGGTATCGATTAGTTGCTGGGCTGAATGCACAATTGCGGTTAGTGCGCCGTGGACGACTAAGAGTAACATTGAGACCTGTCATCAGATGGCTCGACACTCATGCCAATCCTGCATTGAGCGTCCATGGTGTACGTGTTGATCTTGCCTGGTTTGAGGCTACGAGTATTGGCTATGGCCACTATGGGCTTGTGGTTTATGCTctcgaagaagaagaaggttatCCGGCCACTAGAGGAAGTATTGATGGTGCGTCAAGAATTGAGGAAATATCACGGGTTCAGACTGTTAAAAATGACAGTCACTTGGGGCTTGCAAGTGGAGCTCGCTTAAGCCCTGGTGGAAGAACTGAGGACAATTGTATGAGGCGGAAGGTGCATGGAGTTGCTTTAGACGTAAACAATTTGCAGATGCTTGACAAGAAGAGAGATATCTTTTACCTTCTCTCTTTTATACTTCAGAATACAAAACCCGTTGGGCATCAGGATCTTGTTGGTTTAGTAATCTCAATGTTGCTTCTAGGAGATTTTAGTTTAGTATTACTTACCCTGCTTCAGTTGTACTCAATTTCTATGGTGGATGTATTTCTTGTATTGTTTATATTACCTTTTGGCATTCTTCTCCCATTTCCTGTTGGAATCAATGCTCTATTTAGTCATGGACCAAGGCGTTCTGCGGGCCTTGCACGTCTCTATGCTCTGTGGAATCTTACGTCCTTTATAAATGTTGTGGTTGCATTTCTATGTGGATATATTCATTACAACTCTCAATCCTCTTCCAGCAAAAGACACCCCAGCATTCAGCCTTGGAGTATCATGGACGATAATGAATGGTGGATTTTCCCAGCTGGACTGGTTTTGTGTAAATTATTCCAATCTCAACTCATTAATTGGCATGTTGCCAATCTGGAAATCCAAGACCGTTCCTTGTATAGTAACGATTTTGAGCTGTTCTGGCAGTCATGA 3102 0.4288 MSDSVMKVYGALRMTVKMFLMWNSQMFIDGGEDITVATSLLEASNLIVLRGASVIHSNANLGVHGQGLLNLSGPGDWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTNNVTPKLYCDNKDCPYELLHPPEDCNVNTSLSFTLQICRVEDVLVEGLIKGSVVHFHRARTISIESSGTISATGMGCTGGLGGGNILSNGIGSGGGHGGKGGKACYNDYCVEGGISYGTPDLPCELGSGSGNGNSTGTTAGGGIIVIGSLEHPLSSLLIKGSVHADGENFDPAIRREKFVIFDNFTGGPGGGSGGTILLFLHTLAIGKSAILSSIGGYSGISGGGGGGGGRIHFHWSDIPTGDVYQPIAIVKGDIQSGGGKGKGLGGSGENGTISGKACPKGLYGTFCEECPAGTYKNVTGSDRSLCQVCPVHELPHRAVYISVRGGITEAPCPYQCISDRYHMPDCYTALEELIYTFGGPWLFGLLLTSLLILLALVLSVARMKFVGVDELPGPVPPQHSQIDHSFPFLESLNEVLETNRVEESQSHVHRMYFIGPNTFSEPWQLPHTPSEQIHDIVYERAFNTFVVEINAIAAYQWWEGAIHSALSVIGYPLAWSWQQCRRRLKLQRLREFVRSEYDHACLRSCRSRALYEGIKVNATSDLMLAYVDFFLGGDEKRTDLPPQLHERFPMTLLFGGDGSYMAPFTLHNDNILTSLMSQSVQPTTWYRLVAGLNAQLRLVRRGRLRVTLRPVIRWLDTHANPALSVHGVRVDLAWFEATSIGYGHYGLVVYALEEEEGYPATRGSIDGASRIEEISRVQTVKNDSHLGLASGARLSPGGRTEDNCMRRKVHGVALDVNNLQMLDKKRDIFYLLSFILQNTKPVGHQDLVGLVISMLLLGDFSLVLLTLLQLYSISMVDVFLVLFILPFGILLPFPVGINALFSHGPRRSAGLARLYALWNLTSFINVVVAFLCGYIHYNSQSSSSKRHPSIQPWSIMDDNEWWIFPAGLVLCKLFQSQLINWHVANLEIQDRSLYSNDFELFWQS 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00406 1033 SMART GCC2_GCC3_2 393 445 - -
Tsu07g00406 1033 PANTHER PROTEIN, PUTATIVE-RELATED 1 1033 - -
Tsu07g00406 1033 PANTHER EPHRIN TYPE-B RECEPTOR 1 1033 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00406 Tsu-Chr7 3106169 3118548 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00406 - - lja:Lj1g3v2095540.1 1728.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00406 07 3106169 3118548 Tsu07g00406 07 3106169 3118548 ECH