Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00396 ATGAGTAGTGATCAGTTTCAGAAAAATAGCATGTACATAGAAACCCCTGAAGCTTGTATTGACGGTGGCAAAAACTTTGACGAAGATGGACGACCCAAAAGAACGGGTACATGGGTGACTGCAAGTGCACATATAATAACAGCAGTGATAGGGTCAGGAGTGTTATCACTTGCATGGGCAATTGCACAAATGGGTTGGGTTGCAGGACCTGCAGTTCTACTTGCATTCTCTTTTATCACTTATTTCACTTCCACTCTTCTTGCTGATTCTTATCGTTCACCTGATCCTGTTCATGGCAAGAGAAATTACACCTATTCCGAAGTTGTAAAATCTGTCTTagGAGGAAGGAAATTTCAGCTATGTGGATTAGCTCAATATATAAATCTTATCGGTGTAACTATCGGTTACACAATAACTGCTTCAATTAGTATGGTggCGGTGAAGAGGTCAAATTGTTATCACAAACATGGGCATGATGCAAAGTGTTATATATCAAATAATCCTTTCATGATAATATTTGCTTGCATTCAAATTGTTCTTAGCCAAATACCAAATTTCCATAAGCTATCGTGGCTCTCAATTGTTGCAGCCGTTATGTCTTTTGCTTATTCATCCATTGGCCTTGGTCTCTCTATAGCTAAAGTAGCAgGTGGGGGACCTCCGGTGCGGACATCATTAACGGGGGTGCAAGTAGGAGTGGATGTTACAGGAACTGAAAAGGTGTGGAGGATGTTTCAAGCTATTGGTGACATTGCCTTTGCTTATGCTTATTCTAATGTCCTAATTGAGATACAGGATACCTTAAAATCAAGCCCTCCGGAGAACAAGGTCATGAAAAGAGCAAGTTTGATTGGCATATTGACTACAACAATGTTTTATATGCTATGTGGCTGCTTAGGTTATGCAGCATTTGGAAACGATGCACCAGGAAATTTCCTCACAGGGTTCGGCTTCTACGAGCCATTTTGGCTAATAGACTTGGCCAATGTATGCATAGCCGTGCACTTAATTGGAGCATATCAGGTCTTCTGCCAACCCATATTTGGTTTTGTAGAGAGTCAAAGTAAGGAAAAATGGTCTAATAGTCAATTTGTAAATGGAGAGCATGCCATAAACATTCCTTTTTGTGGAACCTTATATGTGAACTTCTTCAGGGTAGTGTGGAGAACAGCATATGTTGTTATCACAGCTTTGATAGCTATGATATTTCCATTCTTCAATGACTTCCTTGGCCTCATCGGTTCACTGTCCTTTTGGCCATTAACGGTTTACTTCCCTGTAGAAATGTACATTAAGCAGTCAAAGATGCAAAGATTTTCTTTCACCTGGACATGGATGAAGATATTGAGTTGGGCATGCCTCATCGTTTCTATCATCTCAGCTGCTGGTTCCATCCAAGGACTCGCTCATGATCTCAAAAAATACCAGCCATTCAAAGCTCAGCAATAA 1449 0.403 MSSDQFQKNSMYIETPEACIDGGKNFDEDGRPKRTGTWVTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLLAFSFITYFTSTLLADSYRSPDPVHGKRNYTYSEVVKSVLGGRKFQLCGLAQYINLIGVTIGYTITASISMVAVKRSNCYHKHGHDAKCYISNNPFMIIFACIQIVLSQIPNFHKLSWLSIVAAVMSFAYSSIGLGLSIAKVAGGGPPVRTSLTGVQVGVDVTGTEKVWRMFQAIGDIAFAYAYSNVLIEIQDTLKSSPPENKVMKRASLIGILTTTMFYMLCGCLGYAAFGNDAPGNFLTGFGFYEPFWLIDLANVCIAVHLIGAYQVFCQPIFGFVESQSKEKWSNSQFVNGEHAINIPFCGTLYVNFFRVVWRTAYVVITALIAMIFPFFNDFLGLIGSLSFWPLTVYFPVEMYIKQSKMQRFSFTWTWMKILSWACLIVSIISAAGSIQGLAHDLKKYQPFKAQQ 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00396 482 Pfam Transmembrane amino acid transporter protein 34 467 IPR013057 -
Tsu07g00396 482 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 13 475 - -
Tsu07g00396 482 PANTHER OS05G0424000 PROTEIN-RELATED 13 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00396 Tsu-Chr7 3026952 3033311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00396 7 480 Organic Solute Cotransporters AT5G49630 77.197 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00396 K24917 - gmx:100777963 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00396 07 3026952 3033311 Tsu07g00396 07 3026952 3033311 ECH