Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00394 ATGCCTCACGTCGTTAAGATTCAACCAGTGGTTATGTTAGAAACTGTTCAGGAAATTTCCATATATGTTCATAGATTTCACAATCTTGATTTGTTTAAACAGGGATGGTATAGGATTAAGATTACTGTAAGATGGGAAGATAGTGAAAATAATTCATTTGGTTTTCCAGCTAGAATTGTTCAATATGACGCTCCTGGTCTGGACCAAAGCAGTATTTATGGAGCATGGAAGATTGATGATACAGAAAACAGTTTCTCAACACAGACCTTTCGGATAAAGTACGCTAAGCAGGATGTTTATTTATGTATGATGATCGCATTCAACTTATCACGTAGTAAATCTGTGGACTTTACTACAAATGGTGTTATTTTAAAGTTTGAGCTTATTTATGCTTCAACACTTGAGGATGGGGCTGACATGCAAGCTTCTCTGGATGCTCCCCCGGCTGCTATCCATGAATTCCGAATTCCTCCCAAAGCTCTGTTGGGATTGCATTCGTATTGTCCCATCCATTTTGATGCTTTACATGCAGTACTTGTTGATGTAAGTGTACATGTCAGTCTACTGAAAGCTGCCTCTCACTCATCTGCATCGAAGGTATCCAGAATGTTTTGCGTGACTGATCAGGGCTTCAGAGGTGTTGCTTCTCAAGATGTGAAAGATATTGTGCTTGTCAGAGCTTTATTAGCTTCTCGTGATTTATTGCTGGAAGAACTACACAAAATTAACAAAGCAGTTAATGATAATGAAGCTATCGATACGTCGGATTTTGTGTCAAATATGAATAATGAAGACTTAATAAATTTTGTGGTGAAAGCAAATGGATTTCCATTGGACGAAGAATTAGGACAAGGCAAGCCACAAAATGGTCTTGAGAGAGAAAATGGTGCTCCTCCTGATATTCAGAAAGCTGAAAAGTTCCATTCCCTCTCTCAGAATGAACTGTTGGATTGTTTTCATTCATTGGGAGATCAATTGTACTATTTatggaaaatatttttgaaaatccATAGGGAAAACAAGACAGAGATACTAGAATTTTTACGCAATACATGGGCTAAGGATCGAAAATCTGAGTGGTCAATATGGATGATGTATTCTAAGGTAGAGATGCCTCACCATTATATAAATAGTGGGAATGATGAGTCTTCTCGTCGTGGTATGCACAAAAGAGTCTCCAGTCTGTGGAAGTTACCTGATGAGCCTCATGAAACTGCAATTACATGTGCCGAACATCATCGGAGGAACATAGCACAGATGCGGATTAACAACCGTTCAATTCAAGACATGCAGATATTTGGAGATCCTTTGCGTATACCAGTTGTGCTTGTTGAAAGGGTGGTGAATGTACCACGGCGTAGTATCAGTGAAATTTCACTCACGGGGCATGTTGGACTTGTTGATTCATATAGCTTAACAAATGGACTCGGGAGTGATACTTTAAGAAAGAAATCTGCACCACAACGTAATGTTCGTGTGTTGAAGATTGTTGTCTTTGTGCATGGGTTTCAGGCATGTCTTGGGCATCATCTGGATCTACGGCTTGTTCGGAATCAATGGCTTTTAATAGATCCCAAAGTAGAATTTCTTATGTCAGAGGCTAATGAAGATAAAACAACCGGAGACTTCAGACAAATGGGACATAGACTAGCTAAGGAAgttatttcttttgttaaaagtAAAATGGACAAAGTAACAAGATATGGGAAATTGGGAGATATTCAGTTAAGTTTTGTTGGACATTCTATGGGTAATCTCATTATCAGAACAGCAATAGCAGATAGCATGATGGAGCCATATCTAAGACACCTACATACATATGTTTCATTATCTGGTCCACACTTGGGGTATCTTTATAGTTCAAACTCATTATTTAATTCTGGAATGTGggttttgaagaagctaaaaaACACGCAGTGCATTCATCAGCTCACCTGCACAGATGATCCAGATTTGAAAAACACGTTCCTATATAAACTGTGTAAGGAGAAGACCTTGGAACATTTTAGGAATGTTATCTTGTTATCTTCCCCTCAGGATGGTTATGTGCCTTACCATTCTGCCAGAATTGAATCATGCCCAGCTGCTTCACATGACACTTCAAAGAAGGGTAAAATGTTCCTAGAGATGCTAAATGCTTGTTTGGACCAAATACGCGCCAACCCCTCTGAACATCGAGTATTCATGCGCTGTGATGTCAATTTTGATGCCTCTTCCCATGGCAAGAATTTGAACTCTTTCATCGGTCGAGCTGCACATATTGAATTTCTTGACTCTGACATTTTTGCAAGCACTTTCATTGTGGAATTATGGGGAGTTTTAGAAGGTTTGAGCCTAGCAAGAAGGATGGGTTTCTCTCATGTGGAGTTAAGCATAGACTCTAAGGATGTTATGGAGATTATCACAACAGGTCAGATGAAGAAAACAAGTGGATATGCTATAGTAAAGAAGATTAGTAGATATTTGGCTATGGATTGGAATGTTGAAGTTTTGCATGAGTATAGATAG 2508 0.3816 MPHVVKIQPVVMLETVQEISIYVHRFHNLDLFKQGWYRIKITVRWEDSENNSFGFPARIVQYDAPGLDQSSIYGAWKIDDTENSFSTQTFRIKYAKQDVYLCMMIAFNLSRSKSVDFTTNGVILKFELIYASTLEDGADMQASLDAPPAAIHEFRIPPKALLGLHSYCPIHFDALHAVLVDVSVHVSLLKAASHSSASKVSRMFCVTDQGFRGVASQDVKDIVLVRALLASRDLLLEELHKINKAVNDNEAIDTSDFVSNMNNEDLINFVVKANGFPLDEELGQGKPQNGLERENGAPPDIQKAEKFHSLSQNELLDCFHSLGDQLYYLWKIFLKIHRENKTEILEFLRNTWAKDRKSEWSIWMMYSKVEMPHHYINSGNDESSRRGMHKRVSSLWKLPDEPHETAITCAEHHRRNIAQMRINNRSIQDMQIFGDPLRIPVVLVERVVNVPRRSISEISLTGHVGLVDSYSLTNGLGSDTLRKKSAPQRNVRVLKIVVFVHGFQACLGHHLDLRLVRNQWLLIDPKVEFLMSEANEDKTTGDFRQMGHRLAKEVISFVKSKMDKVTRYGKLGDIQLSFVGHSMGNLIIRTAIADSMMEPYLRHLHTYVSLSGPHLGYLYSSNSLFNSGMWVLKKLKNTQCIHQLTCTDDPDLKNTFLYKLCKEKTLEHFRNVILLSSPQDGYVPYHSARIESCPAASHDTSKKGKMFLEMLNACLDQIRANPSEHRVFMRCDVNFDASSHGKNLNSFIGRAAHIEFLDSDIFASTFIVELWGVLEGLSLARRMGFSHVELSIDSKDVMEIITTGQMKKTSGYAIVKKISRYLAMDWNVEVLHEYR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00394 835 PANTHER ESTERASE FAMILY PROTEIN, PUTATIVE-RELATED 7 767 - -
Tsu07g00394 835 SUPERFAMILY alpha/beta-Hydrolases 496 692 IPR029058 -
Tsu07g00394 835 Pfam Reverse transcriptase-like 763 835 IPR002156 GO:0003676|GO:0004523
Tsu07g00394 835 PANTHER UNCHARACTERIZED 7 767 IPR044294 -
Tsu07g00394 835 Pfam Protein FAM135 124 188 IPR022122 -
Tsu07g00394 835 Gene3D alpha/beta hydrolase 495 712 IPR029058 -
Tsu07g00394 835 CDD RNase_H_like 733 835 IPR044730 -
Tsu07g00394 835 Pfam Putative serine esterase (DUF676) 494 692 IPR007751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00394 Tsu-Chr7 3011376 3020303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00394 - - gmx:100785285 1107.82