Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00387 ATGTGTAATCCCATTCCCAAGCCATCCTCAGCATCCCCATTTCTTTGTCCCACAAAAACCCACCTCATAACTCCAAACCCCAAACTAGTCATAGATGCTCCTCCTCATGATGAAGTTAAACATCAAGAACATGAACTTCATAGATGGCCAACTCCAAATGAGgtgataaaagaaattaaagcaaTAGGCAAAATATCATGTCCAACAGCTATAACTGGATTACTCTTATATTCAAGAGCTATGATCTCTATGCTTTTCCTCGGCCATCTCGGCGAGACGCAACTTGCCGGAGGTTCTCTCTCCATAGGTTTTGCAAACATAACCGGTTACTCTGTCCTCTCTGGTTTAGCCATGGGAATGGAACCAATTTGTGGACAAGCTTATGGAGCTAAACAATGGAAGATTCTTGTCAACCCAAAATCAACAATTTCTTCAATGGGTATTCTTATTCAAGCAACATCATTGGTTTATGTTTTTCCATCTTCACTTAGTCTTGGTGTTTCAACTAGAGTTGGAAATTTGTTAGGTGAAAATTCTCCTTCAAAAGCACGTTTTTCTATGATAGTGTCAATGttttgtggttttggtttggGGATTTTGGCTATGTTGTTTACTATTTTGATGAGAAATCAATGGGGGAGATTGTTTAGTAGTGATCAAGAGATTCTTAATCTAACAGCTATGGTTTTACCAATTGTTGGGCTTTGTGAGATTGGAAATTGTCCACAAACAACGGGTTGTGGTGTTTTGAGAGGTAGTGCTAGACCTACGgtgggtgcaaatatcaatttaGGGTCATTTTATTTGGTGGGTATGCCAGTTGCTATTGTTCTTGGGTTTATTGTAAAAATGGGCTTTGTTGGGCTTTGGTTTGGGTTGCTTGCGGCCCAAGGCTCTTGTGCTGTTCTTATGTTGTTTGTTCTTTGTACAACGGATTGGAATGATCAAGTTGAAAGATCAAAGAATCTCACAAAAACTACTACAACTAATATTGCTAGTTCTAATTCAACAATAATCACAAAAACAGTATTGTGTCAGCACGACGATGACGACGACAACAATAATAATCACTGTGGTTGTCTTGAAGAGATCTTAGTAATCACaaatggtgatgatgatgttacTAAGACATGTACACACTCCCTTGAAAGAGACCCACTTCTACCAAACATATGTTGTTGA 1182 0.3655 MCNPIPKPSSASPFLCPTKTHLITPNPKLVIDAPPHDEVKHQEHELHRWPTPNEVIKEIKAIGKISCPTAITGLLLYSRAMISMLFLGHLGETQLAGGSLSIGFANITGYSVLSGLAMGMEPICGQAYGAKQWKILVNPKSTISSMGILIQATSLVYVFPSSLSLGVSTRVGNLLGENSPSKARFSMIVSMFCGFGLGILAMLFTILMRNQWGRLFSSDQEILNLTAMVLPIVGLCEIGNCPQTTGCGVLRGSARPTVGANINLGSFYLVGMPVAIVLGFIVKMGFVGLWFGLLAAQGSCAVLMLFVLCTTDWNDQVERSKNLTKTTTTNIASSNSTIITKTVLCQHDDDDDNNNNHCGCLEEILVITNGDDDVTKTCTHSLERDPLLPNICC 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00387 393 PANTHER MULTIDRUG RESISTANCE PROTEIN 36 136 - -
Tsu07g00387 393 PANTHER MULTIDRUG RESISTANCE PROTEIN 135 338 - -
Tsu07g00387 393 Pfam MatE 139 276 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu07g00387 393 Pfam MatE 68 135 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu07g00387 393 PANTHER PROTEIN DETOXIFICATION 36 136 - -
Tsu07g00387 393 PANTHER PROTEIN DETOXIFICATION 135 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00387 Tsu-Chr7 2944858 2946855 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00387 K03327 - gmx:100783792 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00387 07 2944858 2946855 Tsu07g00387 07 2944858 2946855 ECH