Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00385 ATGCGACGCTATAATCGAAAAGGACAATGGCGTAAAATTGCATTCAGGTGCGTCGTTTTTTTCTTCGCTGGTTTTCTATTAGGATTGTTCCCTTTCGGTAATCTCATTCATGAAAttcctcaacaacaacaacaacaacgcaATAACGTCGCTTTTGATATCAATAATACTCCACGCGCTGACGCGCGATTAATGCTCGATGATCGCGTTCCGCAGAAACGCGTTAgcgttggtggtggtggtgaagaTAAGGGTTTTGTGATTGATCCTGTTAGTTTGAGTTTGAATATGAATgctgagaagaagaaagtgaaattgAATGATGTGGTTGAATCTGTTGGGAGATTTGATTTTGTAGCAAGGAAGCAATTGATTGTGGTTACTCCGACTTATAATCGCGCATTTCAGTCGTATTTTTTGAATAGATTAGGGCAGGTTTTGAGGTTGGTTCCGCCGCCGTTACTTTGGGTGGTGGTGGAAATGAATTCTGCTTCAATGGAAACTGCTGAATTGTTGAGGAAAACGGGTGTGATGTATAGACATTTGGTTTGTAAAAAGAATTCAACTGATGTTAAGGATAGAGGTGTTCATCAGAGGAATAGGGCTTTGGAGCATATTGAACATCATAAACTTGATGGGATTGTTTACTTTGCTGATGATGATAATGTATATTCTCTTGAGTTGTTTCAGATAATGAGAGATATCAGTCGTTTTGGCACTTGGCCCGTCGCCATGCTTGCACCAAGCAAGAACAAGGCTATTTTGGAGGGTCCGGTATGTAATGGAAGCCAAGTGATTGGGTGGCATACCAATGAGAAAAGTAAAAGACTCCGTAGATTTCATGTTGATATGTCTGGATTTGCATTCAATAGCACAATCCTGTGGGATCCAAAGCGGTGGCGACGCCCTACTTCAAATCCTATACGGCAACTAGACTCAGTGAAAGAGGGTTTTCAGGAGACCACCTTTATAGAACAATTGGTAGAAGATGAGAATCAAATGGAAGGTTCGCCACCTGGTTGCATGAAAATAATGAATTGGCATCTCCATTTGGATGTTCATAATGTAGTTTATCCAAAGGGTTGGATGCTTGAGAAAAACCTAGATGCTGTGATACCCATCAAGTAA 1128 0.3812 MRRYNRKGQWRKIAFRCVVFFFAGFLLGLFPFGNLIHEIPQQQQQQRNNVAFDINNTPRADARLMLDDRVPQKRVSVGGGGEDKGFVIDPVSLSLNMNAEKKKVKLNDVVESVGRFDFVARKQLIVVTPTYNRAFQSYFLNRLGQVLRLVPPPLLWVVVEMNSASMETAELLRKTGVMYRHLVCKKNSTDVKDRGVHQRNRALEHIEHHKLDGIVYFADDDNVYSLELFQIMRDISRFGTWPVAMLAPSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPTSNPIRQLDSVKEGFQETTFIEQLVEDENQMEGSPPGCMKIMNWHLHLDVHNVVYPKGWMLEKNLDAVIPIK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00385 375 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 118 372 IPR005027 GO:0015018|GO:0016020
Tsu07g00385 375 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 123 369 IPR029044 -
Tsu07g00385 375 SUPERFAMILY Nucleotide-diphospho-sugar transferases 123 368 IPR029044 -
Tsu07g00385 375 CDD GlcAT-I 124 352 IPR005027 GO:0015018|GO:0016020
Tsu07g00385 375 Pfam Glycosyltransferase family 43 143 351 IPR005027 GO:0015018|GO:0016020
Tsu07g00385 375 PANTHER GLYCOSYLTRANSFERASES 118 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00385 Tsu-Chr7 2927828 2930257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00385 3 375 Glycosyltransferase AT1G27600 62.198 9.77e-165 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00385 K20869 - gmx:100809892 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00385 07 2927828 2930257 Tsu07g00385 07 2927828 2930257 ECH