Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00384 ATGGCCGCACCTCCCACCAAAGACCAAGTCCTCTCTCTCCTCGCCGCCGCTAATAACCACGGTGACATCTCCGTCAAAACCAATTCCTTAAAACAAGCCAAAGACCTTCTTCTATCCATAGACCCTTCTCTCGCCGCTGACCTTTTCCCTTATCTCCTCGACCTTCAATCTTCTCATGAAAGCCTCGTCCGCAAATTGCTCATACAAATAATTGAGGAGATTGGTTTTAGAGCAGTTGAACATTCTCCTGCATTAATATCTTCATTGTTAACATTTTTACGAGACAGTGATGTAACTGTTGTAAAACAGTCCATTATTAGTGGCACTAATATATTCTGTGCTTGTTTTGAGGAGTTGATTCTGCAGTTTCAACAATGTGGCAAAGTTGAGAGGTGGTTAGAAGAGATTTGGACGTGGATGCTTAAGTTCAAGGAGGCTGTTTTTGAGATTGCTCTTGAGGGTGGTTCTTATGGAATAAAGTTGCTGGCACTGAAATTCTTGGAGATTTTTGTAttactttttacatctgacatCAGTGATACTGACAAATCTGCCACTGAAGGAGTCCGACAAGCTGTTAATATCTCATGGTTGGTGGGTTCTCACCCTGTTCTTGATCAAATGGTGCTTATGACAGAGGCAAATAGGACAATTggcattttattaaaattgttgCAGTGCTTTGGCAATCTCCCCGGTTGCTTGACAATTACTGTTGTGAATTGTTTAGCGGCCATTGCAAGGAAAAGGTCACAACACTATGATACCATCCTTTCAGCATTGCTTGATTTTGATCCAAATGTTCAAACAGTGAAAGGATGCCATGTTGTCAGTGTTCAGTACTCTATAAGAACAGCTTTTTTGGGTTTTCTAAGATGCACTTATTCTCCGATAATAGAGTCAAGAGAAAGACTGATAAGGAGCCTGCGAGCTATGAATGCGGGGGATGCTGCTGATCAGGTAATTCGGCAAGTAGACAAAATGATTAAAAGTGGTGATCGCTTTACCCGTGATGCTCGAGTTAGCAAGGATGACCAACCATCAACTCAGTTGCCCATTTCTGGGGAATTATCTAGGAAAAGACCTGTTCCTCATGATAATGAACAATTGGCCAATGGTCATGATGCCATTGCTAAGAGGAGTCGTTCTGGTCCTGACTCTGACTTTACTTTACCTGCTCAAATAAATGATTCAGGCCGGGATCTAAGCTCCGTTAACGGAATATCACCTAATGCTCCTGCTCCGGAAAGTGAACTAACTGCTGTGGAGCAAATGATTGCCGTTATTGGTGCTTTGATTGCTGAGGGAGAAAGAGGCGCCAAATCTCTTGAAATACTTATTTCACAGATTCATCCTGATCTGTTGGCTGATATTGTCATAGCTAATATGAAGCACTTGCCTAAGGCACCCCCACCACTAGCAAGGCTTGAAAATCCATCAGTAACTCGCCAAGTAGCTTCCCAAGTCAGTCAATCGCAGGTTATTGCAGCATCTGCTTCAATGAGTTCTGTTCCAGCCTTGGCTGCCTCTGCCCAAGCACAATTTTCTTCAACTACGGCCACTTCCACAGCTACTACCTCATTAGCATCCGACACCTCCAACCTCAGTAACCTTCCTGCTGATTCTAAACGTGATCCACGCCGGGATCCCCGTCGCCTGGATCCACGACGTGGAGCAATAACTCCTGGAGGAGCAGCTATCTCAGTTCCAGATGATACTGGTGCCACAAAATTAGAATCTGAGGATCCTGTGTCTTTTACTAAATCTGCATCACATCATGTTGCAATCACTGACGACATTACCCAATCAGATTtagcaatcaaaataaaaaatgaggaTATGATCTCTGAAGGCCCTCCAATTTCAGGACCTGATCGGGTTACTCCCAAAACAGAGGCTCTTGAAAGACCTGTAGATCACCGGGTTATGGAAACAAATGTTTCTTTGGATCCTGGGGTCTCTTCCACCAATTCAATAGACGAGGATCCGAGTACAGTAAATCTTTTGGATGATACTGAAACAAATGGGACAGATTCATCATCTATTTTAGAGTTTGATCAGTTTTCTCTTGACGTTCAAGTGTCACCCACATCAGAAGATACCTGTTTGGAGTTGCCACAGCTTCCACCATATATTCAACTATCCCAAGAACATGAAAGTAAGGTGAAACACATGGCTATTAGCCATATAATAGAGTCATACAAACATTTGCATGGGGCAGAATGTCAGCAGTTTTGCATGCCACTACTTGCCAGACTTGTAGCTCAGATTGATGACGATAATGTGATCACTGGGATGCTGCAAAAACACATTCTGGAAGACCACTGGCGAAAGGGGCACGAACTTGTTCTGCATGTTCTGTACCATCTCCATTCCTTGATGATAATGGATTCTGCTGGAAACTCTTCATCTTCTGTTTTATATGATAACTTTCTCTTGGGAGTGGCCAAAACTCTCTTGGATTCTTTTCCAGCTACAGACAAGTCTTTTAGCAGACTTCTTGGTGAAGTTCCATTTCTGCCTGAATCTGCCTTGAAGGTTTTGGAGGATCTATGCTACGCTGATGTTATTGATCATGACGGAAAAATTATCCGCGACATCGAGCGTGTAACTCAAGGCCTCGGTTCTATCTGGAGTTTAATTTTGGGGCGTCCACAAAATCGCCAAGGCTGCTTAGGAATAGCATTGAAGTGTGCTGTCCACCCACAGGATGAGATTCGAGCTAAAGCTATTCGGCTGGTAACAAACAAGCTCTTTCAGCTTAGTTACATTGCAGAAGATGTCGTGCAATTTGCAACAAAAATGCTTCTCTCTGCGGTAGATCATGAAACTTCAAATGCAGCGCAATCTGGACTTACTGAACAAAGAACGGAGGTCGAAAGTCTTGACATAACTAGTACTTCACAGGCTTTGGAGTTTGAAAATGACACTACTAGAGTTGCTAAACCAACAAATCAAAGTGTTTCATCTATATCGTTTTCTGAAGCACAACGcctcatttctttattttttgctCTATGTACAAAGAAACCCAGTCTTCTACAGATTGTATTTGATGTATATGGACAAGCCTCAAGAACTGTAAAGCAgGCTTTTCATCGCCACATTCCAAATCTTGTGAGAGCCCTCGGGCAATCGTATTCTGAATTGCTTCATATCATATCTGATCCACCAAAAGGAAGTGAAAATCTTTTGACACTGGTGCTACAAATATTGACTCAAGACACAACTCCATCTTCTGATTTGATATCTACTGTTAAACATTTATATGAAACAAAACTCAGAGATGTCACAATTCTTGTTCCATTATTGTCATCGCTCTCCAAAACAGAGGTTTTACCAATTTTCCCACAACTTGTTGACCTTCCATTGGAAAAGTTTCAAAGGGCACTTGCTCATATACTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACACCTGTAGAAGTTTTGGTTGCAATCCATGGAATTGTTCCTGAGAAAGACGGCCTTGCGCTTAAAAAGATTACAGATGCTTGCTCGGCTTGTTTTGAACAACGTACAGTGTTTACTCAGCAGGTTCTGGCCAAGGCATTGAACCAGATGGTTGATCAAACTCCGTTGCCACTGCTTTTCATGAGAACAGTTATTCAGGCAGTTGATGCTTTTCCTGCACTGGTTGATTTTGTTATGGAGATACTCTCAAAACTGGTGACCAGACAGGTGTGGCGCATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTATATATCAGACGCAGCCACGTTCTTTTCATGTATTATTGCAGTTGCCACCTCAACAATTGGAAAGTGCACTCAACAGACATGCTAATCTCAGAGAGCCCCTTGCTTCTTATGCCAATCAACCAACTGTAAAATCTTCACTTAGTAGATCAACTTTAGCTGTTCTCGGTCTTGCAAATGAAACACATGTACAGCAACATTTACCAACATCATTGCACCATCCTGAGACAAGTACTTCAGTTAGTGGGGCAACTCTGACATGA 4005 0.4175 MAAPPTKDQVLSLLAAANNHGDISVKTNSLKQAKDLLLSIDPSLAADLFPYLLDLQSSHESLVRKLLIQIIEEIGFRAVEHSPALISSLLTFLRDSDVTVVKQSIISGTNIFCACFEELILQFQQCGKVERWLEEIWTWMLKFKEAVFEIALEGGSYGIKLLALKFLEIFVLLFTSDISDTDKSATEGVRQAVNISWLVGSHPVLDQMVLMTEANRTIGILLKLLQCFGNLPGCLTITVVNCLAAIARKRSQHYDTILSALLDFDPNVQTVKGCHVVSVQYSIRTAFLGFLRCTYSPIIESRERLIRSLRAMNAGDAADQVIRQVDKMIKSGDRFTRDARVSKDDQPSTQLPISGELSRKRPVPHDNEQLANGHDAIAKRSRSGPDSDFTLPAQINDSGRDLSSVNGISPNAPAPESELTAVEQMIAVIGALIAEGERGAKSLEILISQIHPDLLADIVIANMKHLPKAPPPLARLENPSVTRQVASQVSQSQVIAASASMSSVPALAASAQAQFSSTTATSTATTSLASDTSNLSNLPADSKRDPRRDPRRLDPRRGAITPGGAAISVPDDTGATKLESEDPVSFTKSASHHVAITDDITQSDLAIKIKNEDMISEGPPISGPDRVTPKTEALERPVDHRVMETNVSLDPGVSSTNSIDEDPSTVNLLDDTETNGTDSSSILEFDQFSLDVQVSPTSEDTCLELPQLPPYIQLSQEHESKVKHMAISHIIESYKHLHGAECQQFCMPLLARLVAQIDDDNVITGMLQKHILEDHWRKGHELVLHVLYHLHSLMIMDSAGNSSSSVLYDNFLLGVAKTLLDSFPATDKSFSRLLGEVPFLPESALKVLEDLCYADVIDHDGKIIRDIERVTQGLGSIWSLILGRPQNRQGCLGIALKCAVHPQDEIRAKAIRLVTNKLFQLSYIAEDVVQFATKMLLSAVDHETSNAAQSGLTEQRTEVESLDITSTSQALEFENDTTRVAKPTNQSVSSISFSEAQRLISLFFALCTKKPSLLQIVFDVYGQASRTVKQAFHRHIPNLVRALGQSYSELLHIISDPPKGSENLLTLVLQILTQDTTPSSDLISTVKHLYETKLRDVTILVPLLSSLSKTEVLPIFPQLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAVDAFPALVDFVMEILSKLVTRQVWRMPKLWVGFLKCIYQTQPRSFHVLLQLPPQQLESALNRHANLREPLASYANQPTVKSSLSRSTLAVLGLANETHVQQHLPTSLHHPETSTSVSGATLT 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00384 1334 MobiDBLite consensus disorder prediction 648 667 - -
Tsu07g00384 1334 PANTHER SYMPLEKIN-RELATED 18 1334 - -
Tsu07g00384 1334 PANTHER SYMPLEKIN-RELATED 18 1334 - -
Tsu07g00384 1334 MobiDBLite consensus disorder prediction 387 401 - -
Tsu07g00384 1334 MobiDBLite consensus disorder prediction 524 586 - -
Tsu07g00384 1334 Pfam Symplekin/PTA1 N-terminal 97 320 IPR032460 -
Tsu07g00384 1334 MobiDBLite consensus disorder prediction 338 401 - -
Tsu07g00384 1334 MobiDBLite consensus disorder prediction 1313 1334 - -
Tsu07g00384 1334 Pfam Symplekin tight junction protein C terminal 1096 1274 IPR022075 -
Tsu07g00384 1334 Gene3D - 2 342 IPR011989 -
Tsu07g00384 1334 MobiDBLite consensus disorder prediction 524 540 - -
Tsu07g00384 1334 SUPERFAMILY ARM repeat 9 924 IPR016024 -
Tsu07g00384 1334 MobiDBLite consensus disorder prediction 359 382 - -
Tsu07g00384 1334 MobiDBLite consensus disorder prediction 541 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00384 Tsu-Chr7 2896391 2916841 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00384 K06100 - gmx:100789876 1996.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00384 07 2896391 2916841 Tsu07g00384 07 2896391 2916841 ECH