Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00358 ATGGCTCTTTTCGAAAACTCAAAAACCTCTTCATTCTTCCTTATACTGCTTCTGCTAGGTAATGTAGCTTCGGGGACAATGTTTACCATAGAAAACCGTTGCAACAAAACAATCTGGCCTGGAACTCTTTCCGGCAATGGCGCTGAACTTCTCGGAGATGGGGGATTTTCCCTGTCGCCTGGATCGTCTGTTCAGTTCACCGCTCCGTTAGGCTGGTCAGGACGTTTTTGGGGTAGAACCGGCTGCAACTTTGACGATGCTGGTAACGGGAATTGCATCACCGGAGATTGCACCGGGGGATTGAAATGCAACGGAGGAGGTGCTCCTCCGGTTACACTGGCGGAATTTACGATCGGAAGCAGGAATGGAGATAAAGACTTTTATGACGTGAGTTTGGTGGACGGTTACAATGTGGGGATAGGGATACGGGCAACCGGCGGAACCGGTGACTGTCAGTATGCAGGTTGTGTTGCGGACTTGAATGGTCACTGTCCGGCAGAGTTGCAAGTAACGGGGGAAGGGGGTTCGGTGGTGGCATGTAAGAGTGCATGTGCGGCGTTTAATACGGAGGAATTTTGTTGCACCGGTGAGCATTCAAGTCCACAGAGTTGTAGTCCAACGCAGTATTCAGAAATGTTTAAGACTGCGTGTCCCTCTGCTTACAGTTATGCTTATGATGATGCTTCAAGCACTTGCACATGTTCTGGAGCCGATTATCATATCACTTTTTGTCCAACTGCTTCCTCTTAG 750 0.492 MALFENSKTSSFFLILLLLGNVASGTMFTIENRCNKTIWPGTLSGNGAELLGDGGFSLSPGSSVQFTAPLGWSGRFWGRTGCNFDDAGNGNCITGDCTGGLKCNGGGAPPVTLAEFTIGSRNGDKDFYDVSLVDGYNVGIGIRATGGTGDCQYAGCVADLNGHCPAELQVTGEGGSVVACKSACAAFNTEEFCCTGEHSSPQSCSPTQYSEMFKTACPSAYSYAYDDASSTCTCSGADYHITFCPTASS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00358 249 ProSiteProfiles Thaumatin family profile. 28 247 IPR001938 -
Tsu07g00358 249 CDD TLP-PA 28 244 - -
Tsu07g00358 249 PANTHER OS03G0233200 PROTEIN 23 245 IPR001938 -
Tsu07g00358 249 SUPERFAMILY Osmotin, thaumatin-like protein 27 245 IPR037176 -
Tsu07g00358 249 SMART tha2 28 245 IPR001938 -
Tsu07g00358 249 PIRSF PR5 2 249 IPR001938 -
Tsu07g00358 249 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Tsu07g00358 249 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Tsu07g00358 249 PRINTS Pathogenesis-related protein signature 235 244 IPR001938 -
Tsu07g00358 249 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Tsu07g00358 249 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Tsu07g00358 249 Gene3D Thaumatin 26 245 IPR037176 -
Tsu07g00358 249 PANTHER PATHOGENESIS-RELATED PROTEIN 5 23 245 - -
Tsu07g00358 249 ProSitePatterns Thaumatin family signature. 88 103 IPR017949 -
Tsu07g00358 249 Pfam Thaumatin family 32 245 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00358 Tsu-Chr7 2693238 2694084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00358 11 245 Receptor kinase-like Gene Family AT5G38280 46.341 3.22e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00358 - - gmx:100809378 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00358 07 2693238 2694084 Tsu07g00358 07 2693238 2694084 ECH