Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00355 ATGCTTCAAGCAATGGAAACTTCCGTTAATAATAACggtgttggtgttggtgttggtgttggtggtggtggtttcTCCGCTCATTTACAAAGCTGCGGTGGTGATAGTAGTGAAGAGGAACTGTCAGTGTTACCTCGTCATACTAAGGTTGTTGTTACAGGAAATAACCGTACAAAATCGGTTCTTGTTGGTCTTCAAGGTGTTGTTAAGAAAGCCGTTGGATTAGGTGGTTGGCATTGGCTGgTTCTTACAAATGGTATTGAAGTGAAGCTACAAAGGAATGCTCTTAGTGTGCTTGAAGCACCTACTGgtaatgaagaagatgatgaccTTGAATTTGATAATGTGCAATGGAATAATGGATCAGATATGGCATCTGACGATACACACAAGTCTCACAAATCGAGGCAAAGAATGCATAGATCATTGGGATCATGTCATAAGACCATGAGTAGGTCCTTCTCTGGTGATTCACAGTCTAAGGGGTCCGTTACAATGTCTCATGGGTCCACGAAAGTTGACTTGAGTAAGCTTGAAATGGCTGCATTGTGGAGATATTGGAGACATTTTAATCTTGTGGATGTCGTCCCAAATCCATCGAAAGAGCAGCTTGTAGATGTTGTTCAGAGGCATTTCATGTCCCAACTGCAATTGGACGAGTTGCAGGTCATTAAAGGATTCGTTAACGCTGCAAAGAGGCTCAAGACTGTGTGCAAATGA 720 0.3847 MLQAMETSVNNNGVGVGVGVGGGGFSAHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEAPTGNEEDDDLEFDNVQWNNGSDMASDDTHKSHKSRQRMHRSLGSCHKTMSRSFSGDSQSKGSVTMSHGSTKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLVDVVQRHFMSQLQLDELQVIKGFVNAAKRLKTVCK 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00355 239 Gene3D - 153 239 IPR038291 -
Tsu07g00355 239 MobiDBLite consensus disorder prediction 141 168 - -
Tsu07g00355 239 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 178 232 IPR025718 GO:0005515
Tsu07g00355 239 MobiDBLite consensus disorder prediction 146 168 - -
Tsu07g00355 239 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 22 239 - -
Tsu07g00355 239 PANTHER SAP30 22 239 IPR024145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00355 Tsu-Chr7 2663085 2666545 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00355 - - gmx:100809195 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00355 07 2663085 2666545 Tsu07g00355 07 2663085 2666545 ECH