Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00343 ATGGCGGCAGATGTAGGTTGCTGTGGAACTAAATTCTGGCTCTACATAGTTGTCATCGTAGGTTTGGTATGTTTCGCTGGTCTCATGGCTGGTCTCACTCTTGGTCTCATGTCTTTAGGACTCGTCGACCTCGAAGTTCTCATCAAATCCGGTCGTCCTCAACATCGTATCCATGCCGccAAAATTTTCCCAGTGGTTAAAAATCAGCATCTTTTGCTATGTACTCTTTTAATCGGAAATTCCTTAGCTATGGAGACTCTTCCTATTTTTCTTGATGCTATTGTGCCTCCTTATGCCGCGGTTTTGATTTCTGTTACACTAATCCTCATCTTTGGAGAgATATTGCCTCAAGCAATTTGTACTCGATATGGATTGATGGTTGGAGCAACACTAGCCCCGCTTGTTCGTGTTCTTCTTCTAGTATTTTATCCCATTGCTTATCCCATCAGTAAGGTACTTGATTGGATGTTGGGTAAAGGAAAAGCCGCTCTTTTAAAGAGGGCAGAGCTCAAGACTTTTGTGAATTTTCATGGGAATGAGGCCGGGAAAGGAGGAGATTTAACGCACGATGAGACAACCATCATAGCCGGTGCGCTTGAATTGACTGAAAAGACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACCCTGAATTCAATAATGACAATGGGTCATAGTAGAGTCCCAGTTTATGCGGGAGAGCGGTCAAACATTATGGGACTTGTTCTGGTTAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTTCTCTAAGAAAAATGATAATCAGAAAAATTCCTCGTGTTTCAGAGAATATGCCTCTGTATGATATACTGAATGAATTTCAGAAGGGTCACAGTCATATTGCAGTTGTATATAGGGATctaaatgataaaaaagatgcatccaaaaaaattaaagacaagGACCAACTTGAGTTTAAGGACAGCTGTAGGAACAAAGGAAAAAGTTCTCCCTTGGATAAAGGTGCATCGTTGGAGTCACGCGATACTTTGACTGCCGGTAATAAGATTGATGGCGTTCCACAAGTGAAAAAAAGTCCACCAGCGACACCTGCTTTTAAAAAGCGGCATAGGGGTTGTTCATATTGCATCCTGGACCTTGATAATGCTCCCTTGCCCGTATTTCCACCCAATGAAGAGGTTGTTGGTGTTATTTCAATGGAGGATGTGATTGAAGAGCTTCTTCAGGTTAGATGCTTTAGTCCACCCTAG 1275 0.4086 MAADVGCCGTKFWLYIVVIVGLVCFAGLMAGLTLGLMSLGLVDLEVLIKSGRPQHRIHAAKIFPVVKNQHLLLCTLLIGNSLAMETLPIFLDAIVPPYAAVLISVTLILIFGEILPQAICTRYGLMVGATLAPLVRVLLLVFYPIAYPISKVLDWMLGKGKAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTMGHSRVPVYAGERSNIMGLVLVKNLFMVDSKAAVSLRKMIIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNDKKDASKKIKDKDQLEFKDSCRNKGKSSPLDKGASLESRDTLTAGNKIDGVPQVKKSPPATPAFKKRHRGCSYCILDLDNAPLPVFPPNEEVVGVISMEDVIEELLQVRCFSPP 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00343 424 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Tsu07g00343 424 Gene3D - 189 323 IPR046342 -
Tsu07g00343 424 SUPERFAMILY CBS-domain pair 194 416 IPR046342 -
Tsu07g00343 424 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 417 - -
Tsu07g00343 424 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Tsu07g00343 424 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 417 IPR045095 GO:0010960
Tsu07g00343 424 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00343 Tsu-Chr7 2583187 2587145 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00343 K16302 - gmx:100527789 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00343 07 2583187 2587145 Tsu07g00343 07 2583187 2587145 ECH