Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00342 ATGTCTGATCAAGTAAATGGCTTGCAAGACAACCAAGCATGGCCAGAGCTAAACCTTCCAGACTTGTTACATAGTGACACTGTTCGACAAGTTCATGCAACAATCGAAAAGGAATGGGATTTCCTTCAAAGGTCAGCTTGCCAAACGGCTGCTGGAAGGGCTATGTGGAAGCATGTGATCGATGACCCACTGGCTGCTTTACTTGCAGGGGAGACTTATTTGAGAAACCTTCATGAAAAGATGAGGAAAGATCATATCAACAATGCTCATGAAACTTCTGGAGTGATACTTGCAGTTCGAACCCTTTGGTTTGATTCTAGGCTTGAAGATGCTCTCAATTCCCCGAGCGGCAGAGAAGCACAGGTTGTTCTACTAGGTGCAGGAATGGACACAAGAGCATATCGTTTGAGTTGCTTAAAGGACAGCAATGTCTTTGAGGTTGACTTTCCCGAAGTCTTGGAGGTGAAGAGCACTATTCTGCAAGCAGCTAAGGAATCCGCATCCGAGTCACAATATAGTGTGTCTAAAGCAAAATCATTAACCCGAGTAGCAGCTGACATAAGAGAAAATGATTGGATGGAAAAGCTTCAAATTGCAGGTTTCTTGCCACAGAAGAGCACAGTTTGGATTCTAGAAGGTATCCTGTACTACCTCGCCCAATCCAACGCCATGCAACTGCTAAGGATTTTAGCTGACAATTGCGTCTTAACCCACACAGTCATCTTAGCAGACTTTATGAATAAGTCATCAACCACGCTATCTGATTCAGTATTCCAATTTTACAGTGATTGGCCAGACCAACTTTTGCCATCTATTGGCTTCAGTCATGTAAAACTTTCACAAATTGGAGACCCAGATGCCCATTTCGGCCTCTTGAATGATCCGTTAAATCTCTTCAACAAGCTCCGCAGCTTGCCTAGGTCATTAGAAACCAATCCAGATGACGGAACACCATGCTGTCGCTTGTATTTGGTGGAAGCTTCTGGTTCACCTGATCAAAGTTCTGCGCATAATAAGGAGTCAGACAGTCACTCCTGA 1038 0.4412 MSDQVNGLQDNQAWPELNLPDLLHSDTVRQVHATIEKEWDFLQRSACQTAAGRAMWKHVIDDPLAALLAGETYLRNLHEKMRKDHINNAHETSGVILAVRTLWFDSRLEDALNSPSGREAQVVLLGAGMDTRAYRLSCLKDSNVFEVDFPEVLEVKSTILQAAKESASESQYSVSKAKSLTRVAADIRENDWMEKLQIAGFLPQKSTVWILEGILYYLAQSNAMQLLRILADNCVLTHTVILADFMNKSSTTLSDSVFQFYSDWPDQLLPSIGFSHVKLSQIGDPDAHFGLLNDPLNLFNKLRSLPRSLETNPDDGTPCCRLYLVEASGSPDQSSAHNKESDSHS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00342 345 PANTHER LEUCINE CARBOXYL METHYLTRANSFERASE 15 326 - -
Tsu07g00342 345 Pfam Leucine carboxyl methyltransferase 46 229 IPR007213 GO:0008168|GO:0032259
Tsu07g00342 345 TIGRFAM mthyl_TIGR00027: methyltransferase, TIGR00027 family 50 246 IPR011610 GO:0008168
Tsu07g00342 345 Gene3D Vaccinia Virus protein VP39 36 290 IPR029063 -
Tsu07g00342 345 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATED 15 326 - -
Tsu07g00342 345 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 325 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00342 Tsu-Chr7 2578216 2580013 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00342 - - pvu:PHAVU_009G057800g 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00342 07 2578216 2580013 Tsu07g00342 07 2578216 2580013 ECH