Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00338 ATGCGAATTCTTAAGAAGCcattctcattttctctctcttactTCTCTCCTAAACTCGTAGCACCTCTTTTATCTTCTCGGATTTGCTTTGCATTTGGAATTTCGGATAAACCTTCACGCCCCTTCGCCAACATCGCATCACCAGGAGCTAAGCAGTTGCATTCTCAATATTCAATGGATGAGACCCATGATGTTGGTATACATGACCCAAGATCAGTGGATTTTCCCGGCAGTGATAGTGGAAAACAGCCACGTGTATGGTCATCTTCTCCTGAACATGGATCAAAAACTGATAGAGGCAAACAGATATTTTGTAACCGGTCACTGAATATGAAGAACATTGTTGCTGTGGGATTTGACATGGATTATACTTTGGCACAATACAAGCCCGAAACTTTTGAATCCCTTGCATACCAAGGCACAATTAAAAAGCTGGTTTACGATTTGGGATATCCTAGTGAGTTGCTAAATTGGTCTTTTAACTGGAAGTACATGGTCAGGGGCTtggttcttgacaaaaaaagaggAAATATCTTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCATGGATTTAGAGAGTTGTCAAAAGAAGATAAAGTTGGGACCTATGGAAATACTTTAGTACGTGATTCATTTGACGAGCCAGACTATGCTCTAATTGATACACTTTTTTCTCTTGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTTAAGGATTGTAATCCTGGAAAGATTCGAGAAGGTGTTGATTATGCTCGGATGTATAAAGATGTTCGAGCTGCAGTTGATTTGTGCCACCGTGATGGGACGTTGAAGCAAATGGTTGCTAAAGATCCTGGAAGGTATATTAATGAAGACACCATGATAGTGCCTATGCTTGAAATGCTCCGAGAATCTGGACGTGCAACATTCTTAGTGACAAATAGTTTATGGGACTATACAAACACTGTCATGAATTTCCTCTGTGGATCCAGAATGATAGGTGGCAATAACAATTTTGACTGGCTTCAATACTTTGACGTTGTCATCACTGGCAGTGCAAAGCCAGGATTTTTTCATGAGGAAAATCGTGCCAACCTATTTGAGGTTGTGCCTGAGACCGGAATGCTACTCAATACAGATAATGGCTCTCCTATGCCTCAGgTGGGGAACATCTCAGCAAGGATATTCACAGAAGCAAAGAATCAAGCTTGCCAAGTTTTCCAGGGAGGCAATGTCGCTCATCTGCATAAACTGCTTTCCATTGAATCAAGTTCACAGGTTCTGTATGTTGGGGATCACATTTATGGAGATATACTACGTAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTAATTCCAGAGCTGGAGAAGGAGGTTAAACTCCTCTGGGAATCAAGGGACACCCGAAAGGAGCTTCAATTGTTGAGGAGTGAACGTGACCGTATTGAGGATGAAGTGCATCATTTGAAGTGGTCTCTCAAATTCAAGAACCCAGATGCTGATACCAAGCAGAAGTTATCTTCAGCACTTGATAAATTGGAGCTCGAAAGAGAGAAAATGCGATTAATCCATCAAGAAGCTCAAAGAAAATTACATCAAAGGTTTCATGAACCATGGGGGCAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCCTGCCTTTATACTAGCCAAGTATCTAACCTGGCCTTGCACTCTCCAGACAAGTATTACAGACCTAGCGAAGATTTTATGCAGCATGAATTTGGCATTCTGGGTTCTGAGCCACGGGAAATGTAA 1800 0.4061 MRILKKPFSFSLSYFSPKLVAPLLSSRICFAFGISDKPSRPFANIASPGAKQLHSQYSMDETHDVGIHDPRSVDFPGSDSGKQPRVWSSSPEHGSKTDRGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPSELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLVRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDCNPGKIREGVDYARMYKDVRAAVDLCHRDGTLKQMVAKDPGRYINEDTMIVPMLEMLRESGRATFLVTNSLWDYTNTVMNFLCGSRMIGGNNNFDWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNISARIFTEAKNQACQVFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVKLLWESRDTRKELQLLRSERDRIEDEVHHLKWSLKFKNPDADTKQKLSSALDKLELEREKMRLIHQEAQRKLHQRFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLALHSPDKYYRPSEDFMQHEFGILGSEPREM 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00338 599 MobiDBLite consensus disorder prediction 68 99 - -
Tsu07g00338 599 CDD HAD_cN-II 104 475 - -
Tsu07g00338 599 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 103 471 IPR008380 -
Tsu07g00338 599 SUPERFAMILY HAD-like 101 590 IPR036412 -
Tsu07g00338 599 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 41 594 IPR008380 -
Tsu07g00338 599 Pfam 5' nucleotidase family 103 589 IPR008380 -
Tsu07g00338 599 Gene3D - 99 149 IPR023214 -
Tsu07g00338 599 Gene3D - 263 481 IPR023214 -
Tsu07g00338 599 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 41 594 - -
Tsu07g00338 599 Coils Coil 464 484 - -
Tsu07g00338 599 Coils Coil 502 529 - -
Tsu07g00338 599 PIRSF NT5C2 79 598 IPR016695 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00338 Tsu-Chr7 2558947 2566170 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00338 - - mtr:MTR_3g111870 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00338 07 2558947 2566170 Tsu07g00338 07 2558947 2566170 ECH