Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00324 ATGGTTGTGATCAGTgctcactcttcttcttcttactgCGCCGTTCCTTCACTCAACAAACCCTACTTCTCTCACAATCTCCGCAATTCAATtccaatttcaatttcttcttctccattTCCACCCACAAGAACAACAATATTATGCCTCGCTTCTCCACCTCTCGCCGCCGAATCTCCTCTCACCGCGAAAGTTGGAAATGGGTTGAAAGATTTTATTCACATAGATGATTTTGATAAAGACACTATTTTGAAGATATTAGATCGAGCTATTGAGGTTAAGACATTGTTGAAATCAGGGGACAGGTCATTTCGACCTTTTGAAGGGAAGACAATGTCTATGATTTTTGCAAAGCCATCTATGAGAACTAGGGTTTCTTTTGAGACTGGCTTTTCATTGTTAGGTGGTCATGCTATTTACTTAGGACCTGATGATATTCAAATGGGTAAGCGAGAGGAGACTCGTGATGTTGCTCGTGTTTTGTCTCGCTATAATGACATTATTATGGCTCGTGTTTTTTCTCATCAGGACATACTTGATCTTGCAAAGTATGCAACTGTCCCCGTCATCAATGGTTTGACAGACTACAATCATCCCGTCCAGATAATGGCCGATGCTCTTACTATGATTGAGCACATAGGTCGGTTTGAAGGAACCAAGGTTGTCTACGTTGGAGATGGAAACAATATTGTCCACTCATGGTTGTTGTTGGCAGCTGTAGTTCCTTTTCACTTCGTCTGTGCATGTCCAAAAGGTTTTGAACCTGATGCAAAAACAGTTGAGAAGGCAAGGAAGGCTGGAATAAGCAAGATTGAGATAAGCAATGATCCCAAAGAAGCTGTTAGAGGAGCTGATGTTGTGTATTCAGATGTCTGGGCCAGCATGGGGCAAAAGGAAGAAGCTGCATACCGTCGCCAAGTGTTTAAAGGATTTCAGGTGGATCAAAGTCTTATGGATGCGGCTGGTTCAAAGGCATTTTTCATGCACTGCTTACCAGCGGAGAGAGGGGTGGAGGTGACTGACGAAGTTGTAGAAGCTTCATATTCAATAGTCTTCCCTCAAGCTGAGAACCGAATGCATGCACAGAATGCTATAATGCTCCATGTACTTGGCAAGTAG 1119 0.412 MVVISAHSSSSYCAVPSLNKPYFSHNLRNSIPISISSSPFPPTRTTILCLASPPLAAESPLTAKVGNGLKDFIHIDDFDKDTILKILDRAIEVKTLLKSGDRSFRPFEGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDVARVLSRYNDIIMARVFSHQDILDLAKYATVPVINGLTDYNHPVQIMADALTMIEHIGRFEGTKVVYVGDGNNIVHSWLLLAAVVPFHFVCACPKGFEPDAKTVEKARKAGISKIEISNDPKEAVRGADVVYSDVWASMGQKEEAAYRRQVFKGFQVDQSLMDAAGSKAFFMHCLPAERGVEVTDEVVEASYSIVFPQAENRMHAQNAIMLHVLGK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00324 372 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 69 371 IPR024904 GO:0004585|GO:0006591
Tsu07g00324 372 Gene3D Aspartate/ornithine carbamoyltransferase 201 366 IPR036901 GO:0006520|GO:0016597|GO:0016743
Tsu07g00324 372 PRINTS Ornithine carbamoyltransferase signature 114 128 IPR002292 GO:0016743
Tsu07g00324 372 PRINTS Ornithine carbamoyltransferase signature 147 160 IPR002292 GO:0016743
Tsu07g00324 372 PRINTS Ornithine carbamoyltransferase signature 187 201 IPR002292 GO:0016743
Tsu07g00324 372 PRINTS Ornithine carbamoyltransferase signature 287 297 IPR002292 GO:0016743
Tsu07g00324 372 PRINTS Ornithine carbamoyltransferase signature 349 360 IPR002292 GO:0016743
Tsu07g00324 372 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 70 211 IPR006132 GO:0006520|GO:0016743
Tsu07g00324 372 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 217 368 IPR006131 GO:0006520|GO:0016597|GO:0016743
Tsu07g00324 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 116 135 IPR006130 GO:0006520|GO:0016597|GO:0016743
Tsu07g00324 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 198 209 IPR006130 GO:0006520|GO:0016597|GO:0016743
Tsu07g00324 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 323 332 IPR006130 GO:0006520|GO:0016597|GO:0016743
Tsu07g00324 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 335 358 IPR006130 GO:0006520|GO:0016597|GO:0016743
Tsu07g00324 372 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, CHLOROPLASTIC-LIKE 32 371 - -
Tsu07g00324 372 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 69 371 IPR036901 GO:0006520|GO:0016597|GO:0016743
Tsu07g00324 372 Gene3D Aspartate/ornithine carbamoyltransferase 70 200 IPR036901 GO:0006520|GO:0016597|GO:0016743
Tsu07g00324 372 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 32 371 - -
Tsu07g00324 372 TIGRFAM orni_carb_tr: ornithine carbamoyltransferase 70 370 IPR002292 GO:0016743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00324 Tsu-Chr7 2492416 2495611 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00324 K00611 - gmx:100796780 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00324 07 2492416 2495611 Tsu07g00324 07 2492416 2495611 ECH