Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00323 ATGAAGCACAAGTTCTCTCTAGTTTTCTTAGTTCTCCATGTGATCTTACTACTCAACGTAGAAGCAGCAGATGATGAGTTTATCAAAACAAGAGGAGTGCAGCTTATGCTTAATGGGAGCCCCTATTATGCTAATGGTTTCAATGCATATTGGTTAATGTATTTTGCTTCTGATCCATCTCAGAGAAACAAGGTTTCATCAACGTTTCAAGAGGCTGCAAATCATGGACAGAACATAGCTAGAACTTGGGCTTTTAGTGATGGTGGATACAAACCACTGCAATATTCTCCTGGATCCTACAATGAGGAAATGTTTCAGgggtTAGACTTTGTACTAGTTGAAGCTAGAAAATATGGGATCAAGGTGATTTTGAGTTTGGTGAACAACTATGAGAATTTTGGAGGAAAGAAACAATATGTGGAATGGGCAAGGAGTCAAGGCCAGTCCATAAATTCTGAAGATGATTTCTACACTAATTCTGTTGTGAAGGGTTACTATAAAAACCACATCaagAGCGTGCTTACAAGACGTAACAGCTTGAGTGGAGTTGCTTACAAAGATGACCCTACAATAATGGCTTGGGAGCTTATGAATGAGATTAGATGCCCTTCAGATCACTCTGGAAATACGGTTCAGGGTTGGATTAGTGAGATGGCATCTTACTTGAAATCCATAGATGGAAACCATTTGCTTGAAGCTGGTTTGGAAGGTTTCTACGGGCAGTCAAATAGAGACTCTAATCCTAACTTCCAACTTGGAACTGATTTCATTGCAAACAACCAAATCCCCACCATCGATTTTGCAACACTACACTCCTACCCTGATCAATGGCTATCAAATAAAGGCTATGAAGACCAAATCTCTTTCTTACATGGTTGGCTCAGTGACCACATCCAAGATGCACAGAACATCCTTCACAAGCCACTTCTATTGGCAGAGTTTGGCATTTCCACTAAAAATTTAGGCAATAATAACTCAACACTGAGGGATCAGTTTTTCAATACTGTTTATTCAGCTATATATTCATCAGCAAGTGGTGGCGGAGCTGCTGTTGGTGGTTTATTTTGGCAACTTCTTGCGGAAGGAATGGATTCTTTCCGAGATGATTATGAGGTGATATTAGCTCAGAGTTCCTCAACAGCTACCTTGATTGCTCAAGAGTCTCAAAAACTACGGCGAATTCGCAAGATGTACGCCAGACTCAAAAACATTGACAAATGGAACAAATCAAAGAGAAATTAG 1242 0.3969 MKHKFSLVFLVLHVILLLNVEAADDEFIKTRGVQLMLNGSPYYANGFNAYWLMYFASDPSQRNKVSSTFQEAANHGQNIARTWAFSDGGYKPLQYSPGSYNEEMFQGLDFVLVEARKYGIKVILSLVNNYENFGGKKQYVEWARSQGQSINSEDDFYTNSVVKGYYKNHIKSVLTRRNSLSGVAYKDDPTIMAWELMNEIRCPSDHSGNTVQGWISEMASYLKSIDGNHLLEAGLEGFYGQSNRDSNPNFQLGTDFIANNQIPTIDFATLHSYPDQWLSNKGYEDQISFLHGWLSDHIQDAQNILHKPLLLAEFGISTKNLGNNNSTLRDQFFNTVYSAIYSSASGGGAAVGGLFWQLLAEGMDSFRDDYEVILAQSSSTATLIAQESQKLRRIRKMYARLKNIDKWNKSKRN 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00323 413 Pfam Cellulase (glycosyl hydrolase family 5) 45 325 IPR001547 GO:0004553|GO:0071704
Tsu07g00323 413 Gene3D Glycosidases 23 395 - -
Tsu07g00323 413 Coils Coil 384 404 - -
Tsu07g00323 413 PANTHER - 7 411 IPR045053 GO:0004553
Tsu07g00323 413 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 7 411 - -
Tsu07g00323 413 SUPERFAMILY (Trans)glycosidases 27 381 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00323 Tsu-Chr7 2487847 2490552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00323 4 411 Glycoside Hydrolase AT5G66460 62.110 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00323 K19355 - gmx:100794126 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00323 07 2487847 2490552 Tsu07g00323 07 2487847 2490552 ECH