Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00305 ATGAGTTACATATGCTGCGCACATGCACGTAGTCTACATATTATAGCAGTTTCAAGAAAATCAATGGCAGCCATGAAGAACAACCTACTTGTTACTATTCTGTTATCATTGGCCATCTGCTGTTTAGTTTTAACGGTTGGATTAACGGTGGAGCCAACTTTAACGGAGATTGGACTGGATGGTGAAGTGAGTGTAGAAGCTTCGGAATTAGAAGCAGTTTCATTGGATTTCGGGAGGTTAAGTAGGAGAGAAGAGAAGACGACGTTGGCCCTAGTTCGGCCAGCGTCGCTAGATGATGTGGTCAAGGTAGTTAAAGCCGCAAATAAGTGGCCATCTTTTGCGGTGTCGGCGAGAGGACACGGACACTCAATAAGTGGACAAGCGGATACAAGGATGAAAGGTGTGGTGATTGAAATGGGAAAAGGTAGTGGAGAAATTAAAGTTTGGGAGAAAGAAATGTATGTGGATGTTTGGGGTGGAGAATTGTGGATAGATGTGTTGAAGGCAACAATGGAGTATGGGTTAGCACCTATGTCTTGGACTGATTACTTGTATTTGTCTGTGGGTGGTACCTTATCCAACGCTGGTATTAGTGGTCAAACTTTCAATTATGGTCCTCAAATCTCCAATGTTTTTGAACTTGATGTTGTTACAGGAAAGGGTGAGGTGATGACGTGTTCAGAAGAACGTAACTCAGACTTGTTCCATGCTGTTCTTGGTGGTCTTGGACAATTTGGGATCATCACAAGAGCTAGAATTGCTCTTCAACCAGCTCCTCAAAGAGTTCGTTGGATACGAGTTTTGTACTCGAATTTTTCAACCTTTAGTAAGGACCAGGAGTTTCTTATCTCACTGCATGGGAGACAAGCAAGCCAAAGATTTGATTATGTTGAAGGTTTTGTGATAGTTGATGAAGGACTCATCAATAACTGGAGGTCCTCTTTCTTTTCACCAAGTAATCCTGTTAAAATCAGTTCTCTTAATGCTGATGGAGGTGTTTTGTACTGTTTAGAAATTACCAAAAACTACCACCAAGGAAATGCTGATTCTGTTGATGAGGAAATAGAAGCTCTATTGAAAAAGCTAGATTTTATACCAACATCAGTGTTCACAACAGACGTGCCTTATGTGGATTTTCTGAATCGTGTACATAAGGCAGAACTCAAACTTAGATCTAAGGGTTTATGGGACGTATCCCATCCATGGCTCAATCTTTTTGTTCCAAAATCAAGGATAGAAGATTTTGACAAGGGTGTGTTCAAGGGCATTTTGGGAAATAAGACAAGTGGTCCTATTCTCATCTACCCTATGAACAAAAACAAGTGGGACCATCGGAGCTCGGTGGTGACACCAGAAGAGGAGGTGTTTTACCTGGTGGCATTTCTGAGATCAGCTTTGGATGCTGAGACACTGGAATACCTGACTAATGAGAACCGTCAGATTATGAGATTCTGCCATGATTCAAAGATCAAGGTGAAACAGTATCTGCCCCATTACACAACATTACAAGATTGGATGGACCACTTTGGAGATAAGTGGACCCAATTCAATGCCATGAAGATGCAATTCGACCCTCGTCGAATCTTAGCAACTGGCCAGCGTATATTTGATTCTGTTGAACCTTCCACCGTCATCACTAAGGATGACATGTAA 1653 0.4186 MSYICCAHARSLHIIAVSRKSMAAMKNNLLVTILLSLAICCLVLTVGLTVEPTLTEIGLDGEVSVEASELEAVSLDFGRLSRREEKTTLALVRPASLDDVVKVVKAANKWPSFAVSARGHGHSISGQADTRMKGVVIEMGKGSGEIKVWEKEMYVDVWGGELWIDVLKATMEYGLAPMSWTDYLYLSVGGTLSNAGISGQTFNYGPQISNVFELDVVTGKGEVMTCSEERNSDLFHAVLGGLGQFGIITRARIALQPAPQRVRWIRVLYSNFSTFSKDQEFLISLHGRQASQRFDYVEGFVIVDEGLINNWRSSFFSPSNPVKISSLNADGGVLYCLEITKNYHQGNADSVDEEIEALLKKLDFIPTSVFTTDVPYVDFLNRVHKAELKLRSKGLWDVSHPWLNLFVPKSRIEDFDKGVFKGILGNKTSGPILIYPMNKNKWDHRSSVVTPEEEVFYLVAFLRSALDAETLEYLTNENRQIMRFCHDSKIKVKQYLPHYTTLQDWMDHFGDKWTQFNAMKMQFDPRRILATGQRIFDSVEPSTVITKDDM 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00305 550 Pfam FAD binding domain 90 227 IPR006094 GO:0050660
Tsu07g00305 550 SUPERFAMILY FAD-linked oxidases, C-terminal domain 259 537 IPR016164 GO:0003824|GO:0050660
Tsu07g00305 550 PANTHER CYTOKININ OXIDASE 5-RELATED 32 538 - -
Tsu07g00305 550 Gene3D - 74 536 IPR016167 -
Tsu07g00305 550 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 259 536 IPR015345 GO:0009690|GO:0019139|GO:0050660
Tsu07g00305 550 Gene3D - 262 495 IPR016170 -
Tsu07g00305 550 PANTHER GULONOLACTONE OXIDASE 32 538 - -
Tsu07g00305 550 Gene3D - 139 260 IPR016169 -
Tsu07g00305 550 SUPERFAMILY FAD-binding/transporter-associated domain-like 60 257 IPR036318 GO:0050660
Tsu07g00305 550 ProSiteProfiles PCMH-type FAD-binding domain profile. 82 258 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00305 Tsu-Chr7 2349869 2355720 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00305 K00279 - gmx:100790584 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00305 07 2349869 2355720 Tsu07g00305 07 2349869 2355720 ECH