Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00301 ATGAACTATTTCACTTTCATGTTACAATTTTGTTCTCTCTTTCTCCTTTTGTCTCTTTCATTTTTGGTCTCTGCTTCCGACACTTCTAAACTCTTCCAAGACTGGTGCAAACAACATGGCAAAACATATCCTTCGGAAGAAGAAAAACATTACAGGTTCAAAGTGTTTGAAGACAATTATGCTTTTATCACACAACATAATCAAATGCAAAATTCCAGTTATACCCTCTCCCTCAACGCTTTCGCAGATCTCACTCACCATGAATTCAAAACCACTCGTCTTGGTCTTCCACCTTCTTCGTTGCTAAAATTCAAATTCGAACGTTTTCAAGATCATCAAtctgatgatgataatgatgttcTACAAGTTCCTTCTGAGATTGATTGGAGAAATAGTGGTGCTGTTACTTCTGTCAAAGATCAAGGAAGCTGTGGTGCTTGTTGGTCATTTTCGGCAACCGGCGCTATCGAAGGGATAAATAAAATTGTGACGGGTTCTCTTGTAAGCCTTTCTGAACAAGAACTGGTAGATTGCGATACCACTTATAATAGTGGTTGTGATGGTGGACTCATGGACTATGCATACCAATTTATCATTGACAACAAAGGGATTGACACCGAGGAAGATTACCCGTATCAAGCTCGCCAAGTACTTTGCAAAAAGGACAAGTTAAAAAGGCGTGTTGTGACCATTGATGGTTATACTGATGTGCCTCCAAACGATGAGAAAAAACTACTAAAGGCCGTTGCAGTTCAACCTGTCAGCGTAGGCATATGCGGTAGTGCAAGGGCTTTCCAATTATACTCAAAGGGTATCTTCACTGGACCATGTCCAACTTCTCTTGATCATGCGGTGTTGATTGTAGGATATGGTTCCGAAAATGGAGTAGATTATTGGATTGTGAAGAATTCCTGGGGAAAAAATTGGGGAATAAATGGTTATATACACATGTTACGAAACACTGATAATTCTGCAGGGTTGTGTGGAATAAACATGTTAGCTTCATATCCAACCAAAACCAGTCCTAATCCTCCTGTCCCACCACCGCCAGGTCCTGTAAGGTGTAATTTGTTTACTCGCTGTTCAAGCGGGGAAACATGTTGTTGTGCCACAAAATTTCTTGGAATATGTTTCTCTTGGAAATGCTGTGGTTTAACTTCTGCTGTGTGTTGTAAAGACAAGCGTAGCTGTTGCCCACAAGACTATCCGGTTTGCGACACAAGAAGGGGCCAATGTCTTAAGAGAATTGCAAATGGGACGACGACAACAATGCCATCTGATAAAGAAGATACTTTCCATCAGAAAAGAGACTGGAGCTCTCATTGA 1326 0.402 MNYFTFMLQFCSLFLLLSLSFLVSASDTSKLFQDWCKQHGKTYPSEEEKHYRFKVFEDNYAFITQHNQMQNSSYTLSLNAFADLTHHEFKTTRLGLPPSSLLKFKFERFQDHQSDDDNDVLQVPSEIDWRNSGAVTSVKDQGSCGACWSFSATGAIEGINKIVTGSLVSLSEQELVDCDTTYNSGCDGGLMDYAYQFIIDNKGIDTEEDYPYQARQVLCKKDKLKRRVVTIDGYTDVPPNDEKKLLKAVAVQPVSVGICGSARAFQLYSKGIFTGPCPTSLDHAVLIVGYGSENGVDYWIVKNSWGKNWGINGYIHMLRNTDNSAGLCGINMLASYPTKTSPNPPVPPPPGPVRCNLFTRCSSGETCCCATKFLGICFSWKCCGLTSAVCCKDKRSCCPQDYPVCDTRRGQCLKRIANGTTTTMPSDKEDTFHQKRDWSSH 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00301 441 Pfam Papain family cysteine protease 123 337 IPR000668 GO:0006508|GO:0008234
Tsu07g00301 441 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 141 152 IPR000169 -
Tsu07g00301 441 SUPERFAMILY Cysteine proteinases 28 338 IPR038765 -
Tsu07g00301 441 SMART GRAN_2 355 412 IPR000118 -
Tsu07g00301 441 SMART Inhibitor_I29_2 32 89 IPR013201 -
Tsu07g00301 441 SUPERFAMILY Granulin repeat 352 385 - -
Tsu07g00301 441 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 281 291 IPR025660 -
Tsu07g00301 441 PRINTS Papain cysteine protease (C1) family signature 141 156 IPR000668 GO:0006508|GO:0008234
Tsu07g00301 441 PRINTS Papain cysteine protease (C1) family signature 298 304 IPR000668 GO:0006508|GO:0008234
Tsu07g00301 441 PRINTS Papain cysteine protease (C1) family signature 283 293 IPR000668 GO:0006508|GO:0008234
Tsu07g00301 441 Gene3D Granulin 352 416 IPR037277 -
Tsu07g00301 441 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 298 317 IPR025661 -
Tsu07g00301 441 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 18 372 - -
Tsu07g00301 441 Gene3D Cysteine proteinases 18 340 - -
Tsu07g00301 441 PANTHER OS05G0508300 PROTEIN 18 372 - -
Tsu07g00301 441 CDD Peptidase_C1A 124 337 IPR039417 -
Tsu07g00301 441 Pfam Cathepsin propeptide inhibitor domain (I29) 32 89 IPR013201 -
Tsu07g00301 441 Pfam Granulin 366 413 IPR000118 -
Tsu07g00301 441 SMART pept_c1 123 338 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00301 Tsu-Chr7 2322400 2325813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00301 - - mtr:MTR_3g112430 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00301 07 2322400 2325813 Tsu07g00301 07 2322400 2325813 ECH