Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00284 ATGAGTAAGAGACCATCACCAGATCCTGTGGCAGTGCTACGAGGTCATCGCGCTTCCGTCACCGATATTTCTTTCCATCCATTTAAGCCTATATTATTCTCCGGTTCTGCTGATGGTGAACTGCGAATTTGGGATACCTTTCGTCGTCAGACAGTTTCATCAGCATGGTTACATAGTGCTGCACATGGGATTGTTGCTCTTGCCAGTAGTTCTTCGCTTGGGACTAATAAATTTGTCAGCCAGGGTAGGGATGGAACTCTCAAAGTTTGGGATTTTGATGATGCTGGTTTGTCTAGAATTCCATCACTTACAATCAAGACAAACACTTACCACTTTTGTAAGTTTTCCATGGCTAAGAATCAGAGTACTGGGTTAAAAGAAGGGGAACCATCAAAAGATTGCATTGAAACAGAAGAGGCTCATACTAATCAAAGCTGTTCTGAAAGCTCTGAAGGGCTACCGTATGTGGCTTTGTCGGGAGAGAACTCTTCTGAGGTTGAAATTTGGGATCTCAAGTCAGCTGAAAGATTTGTACGACTCCCTTCAAACATTGGTCATAACTCTTCAAGTGTTAGCAGCAAAGGGATGTGCATGGCACTTCAATTGTTCGTACCATCTGAATCACGAGGATTTTTAAATGTCATGGCTGGATATGAAGATGGTTCCATGCTTTGGTGGGATGTACGGAATCCTGGAGCTCCAATAAGTTCTGTGAAATTCCATTCTGAGCCAGTTCTGAGCGTCTGTATTGACGAGTCTTGCAAAGGAGGTGTCTCGGGAGCTGCAGATGAGAAGATTGTGATGTACAGTTTGGATCATTCTTCGGGTACATGTGTGGTCAATAAAGAAATCACATTGGAGCGACCTGGCATCTCAGGCACCTCAATTCGGCCCGATGGCAAAATTGCTGCAACTGCTGGCTGGGATCACAGAGTAAGGATATATAACTACCGCAAAGGAAATGCTTTAGCTGTACTCAAGTATCATCATGCCACGTGCAACGCTGTAACTTTTTCGTCTGATTGTAAACTTATGGCCTCTGCATCGGCAGACTCAACCGTGGCGCTATGGGAATTGTATCCTCCTCGAACATGA 1095 0.4447 MSKRPSPDPVAVLRGHRASVTDISFHPFKPILFSGSADGELRIWDTFRRQTVSSAWLHSAAHGIVALASSSSLGTNKFVSQGRDGTLKVWDFDDAGLSRIPSLTIKTNTYHFCKFSMAKNQSTGLKEGEPSKDCIETEEAHTNQSCSESSEGLPYVALSGENSSEVEIWDLKSAERFVRLPSNIGHNSSSVSSKGMCMALQLFVPSESRGFLNVMAGYEDGSMLWWDVRNPGAPISSVKFHSEPVLSVCIDESCKGGVSGAADEKIVMYSLDHSSGTCVVNKEITLERPGISGTSIRPDGKIAATAGWDHRVRIYNYRKGNALAVLKYHHATCNAVTFSSDCKLMASASADSTVALWELYPPRT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00284 364 PANTHER - 133 364 - -
Tsu07g00284 364 PRINTS G protein beta WD-40 repeat signature 32 46 IPR020472 -
Tsu07g00284 364 PRINTS G protein beta WD-40 repeat signature 345 359 IPR020472 -
Tsu07g00284 364 PRINTS G protein beta WD-40 repeat signature 78 92 IPR020472 -
Tsu07g00284 364 ProSiteProfiles Trp-Asp (WD) repeats profile. 326 364 IPR001680 GO:0005515
Tsu07g00284 364 ProSitePatterns Trp-Asp (WD) repeats signature. 345 359 IPR019775 -
Tsu07g00284 364 SMART WD40_4 6 45 IPR001680 GO:0005515
Tsu07g00284 364 SMART WD40_4 231 270 IPR001680 GO:0005515
Tsu07g00284 364 SMART WD40_4 131 170 IPR001680 GO:0005515
Tsu07g00284 364 SMART WD40_4 319 358 IPR001680 GO:0005515
Tsu07g00284 364 SMART WD40_4 277 316 IPR001680 GO:0005515
Tsu07g00284 364 SMART WD40_4 50 91 IPR001680 GO:0005515
Tsu07g00284 364 ProSiteProfiles Trp-Asp (WD) repeats profile. 13 54 IPR001680 GO:0005515
Tsu07g00284 364 Gene3D - 202 363 IPR015943 GO:0005515
Tsu07g00284 364 SUPERFAMILY WD40 repeat-like 6 358 IPR036322 GO:0005515
Tsu07g00284 364 Pfam WD domain, G-beta repeat 323 357 IPR001680 GO:0005515
Tsu07g00284 364 Pfam WD domain, G-beta repeat 295 316 IPR001680 GO:0005515
Tsu07g00284 364 Pfam WD domain, G-beta repeat 9 45 IPR001680 GO:0005515
Tsu07g00284 364 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 326 364 - -
Tsu07g00284 364 Gene3D - 4 201 IPR015943 GO:0005515
Tsu07g00284 364 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 13 45 - -
Tsu07g00284 364 MobiDBLite consensus disorder prediction 123 150 - -
Tsu07g00284 364 PANTHER TRANSDUCIN BETA-LIKE 3 133 364 - -
Tsu07g00284 364 PANTHER TRANSDUCIN BETA-LIKE 3 3 120 - -
Tsu07g00284 364 PANTHER - 3 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00284 10 92 Miscellaneous Gene Families AT5G08390 31.325 8.05e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00284 K24770 - gmx:100800482 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00284 07 2164378 2170225 Tsu07g00284 07 2164378 2170225 ECH