Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00272 ATGGCAAAATCAAGATCAAAAGGAGGATGTTGTGGTTGGTTTATTGCGCTTGTGATTCTTGCTCTTGTAGTTGGTGCTATTGTTTATGGAATTAAGAAGAAAATCGATAGTAATTCAGATAAAGCAGCACCTGTTCCTGGTCCTCCTGGTGCCATTGAACAGAAATATGCTTCTGCTCTCAAAACTGCAATGCAATTCTTCGATGTGCAAAAGTCTGGCAAGTTAGTGAACAACAAAATAAGTTGGAGAGGGGATTCGGGTCTTAAGGACGGAAGTCAAGCAAATTTAGATCTGTCAAAAGGATTGTATGATGCCGGGGATCACATGAAGTTTGGTTTTCCTATGGCTTTTACTGCCACGGTGCTATCGTGGGCGATTCTTGAATATGGAGATCAAATGGATGCTGTAGGCCAGTTGGAACCAGCTCAAGATTCGCTCAAGTGGATCACTGATTATCTTGTCAATGCTCACCCTTCGGAGAATGTTCTGTATATTCAGGTCGGAGATCCTGTTGCAGATCACAAGTGTTGGGATAGACCTGAGTCAATGACCGAGGCACGACCCCTCGTACAAGTGAACACATCCTGTCCTGGATCAGATGTTGCAGCTGAAACTGCCGCAGCCATGGCATCAGCATCTTTGGTCTTCAAAGAGTCAGATTCTACATATTCAAGCACTCTCCTCAAGCATGCAAAACAGTTATTTACTTTTGCGGACAAGCATAGAGGAATTTACAGTGAGAATATACCTGAAGTTGCGACATATTATAACTCAACTGGATATGGGGATGAGCTTTTGTGGGCAGCTGCCTGGCTCTATCATGCTACAGGTGATAATTCTTACCTTCAGTATGCGACTGGCCAAAATGGAGAAGACTACGCTCAATTTGGAAGCCCGACCTGGTTTAGTTGGGACAACAAACTTGCCGGAACTCAGGTTTTGTTATCCAGAGTAAGCTTTTTTAAGGCCAAGGGTCTTTCCAGTTCATATGGCTCTGGCCTCCAAAATTACCGGAAAACTGCTGAGGCTGTAATGTGTGGCCTTCTTCCAGATTCTCCCACAGCCACAGAAAGCAGAACAGAGCATGGTCTGATATGGGTGAGCGAGTGGAACTCTTTGCAGCAACCTGTTGCATCTGCATTCTTAGCTACTATTTACAGTGATTATATGCTTACAACGCAGACCcccaaaataaaatgtgattcAGATTCCTTCACCCCATCAGATCTTCGAAACTTTGCCAGATCTCAGGCTGATTACGTGTTGGGCAAGAATCCTCTGCATATGAGTTTTCTAGTGGGATATGGAAACAAATTCCCACAATTTGTGCATCACAGAGGCGCTTCAATTCCTGCTAATGCAAAAACTGGTTGCAAGGACGGCTTCCAGTATCTTGACTCACCTGATCCAAATCCCAATATAGCTACTGGAGCACTTGTTGGTGGCCCCTTCTTAAATGATACTTTTATTGATTCCAGGAACAATTCTATGCAAACAGAACCAAGCACATATAACAGTGCTGTCATAGTTGGTTTGTTGTCAAGTTTGGTCACCACATCTTCGGCCGTTCAATCGTTTTCCTAA 1584 0.4337 MAKSRSKGGCCGWFIALVILALVVGAIVYGIKKKIDSNSDKAAPVPGPPGAIEQKYASALKTAMQFFDVQKSGKLVNNKISWRGDSGLKDGSQANLDLSKGLYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDAVGQLEPAQDSLKWITDYLVNAHPSENVLYIQVGDPVADHKCWDRPESMTEARPLVQVNTSCPGSDVAAETAAAMASASLVFKESDSTYSSTLLKHAKQLFTFADKHRGIYSENIPEVATYYNSTGYGDELLWAAAWLYHATGDNSYLQYATGQNGEDYAQFGSPTWFSWDNKLAGTQVLLSRVSFFKAKGLSSSYGSGLQNYRKTAEAVMCGLLPDSPTATESRTEHGLIWVSEWNSLQQPVASAFLATIYSDYMLTTQTPKIKCDSDSFTPSDLRNFARSQADYVLGKNPLHMSFLVGYGNKFPQFVHHRGASIPANAKTGCKDGFQYLDSPDPNPNIATGALVGGPFLNDTFIDSRNNSMQTEPSTYNSAVIVGLLSSLVTTSSAVQSFS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00272 527 PANTHER ENDO-1,4-BETA-GLUCANASE 10 526 - -
Tsu07g00272 527 PANTHER ENDOGLUCANASE 2 10 526 - -
Tsu07g00272 527 SUPERFAMILY Six-hairpin glycosidases 54 519 IPR008928 GO:0005975
Tsu07g00272 527 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 420 446 IPR018221 -
Tsu07g00272 527 Gene3D - 52 520 IPR012341 GO:0005975
Tsu07g00272 527 Pfam Glycosyl hydrolase family 9 56 513 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00272 Tsu-Chr7 2067231 2071272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00272 3 526 Glycoside Hydrolase AT1G75680 71.293 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00272 - - gmx:100812226 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00272 07 2067231 2071272 Tsu07g00272 07 2067231 2071272 ECH