Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00262 ATGAAGGCAACGAAGAGACCGATCTACGCCGTAACTAAATGGCTTCGCCGTCAACCACCCAAGATGAAGCTCTTTCTGGCAACTCTTTTGGCCTTTCTAGCATTGCTTTTTCTTAGAATGGTAGTTCACGATCACGACAACCTCTTCGTAGCTGCTGAACTTGTGCATGCATTAGGAATTTCTCTCCTCATTTACAAACTCGCTCAAGAAAAAACTTGCGCTGGACTCTCACTTAAATCACAAGAACTCACAGCTATATTTCTAGCTGTTAGATTGTACTGCAGTTTTGTCATGGAATATGATATACACACCTTACTTGATACTGCAACATTGGGGACGACTCTCTGGGTTATTTATATGATACGTTTCAAACTGAAATCCAGTTATATGGATACTAAGGATAACCTTGCAATATACTATGTGGTGATACCTTGCGCTGTACTGTCTTTGCTCATTCATCCAACAACCCGGCATCATCCAATTAACAGGATTCTCTGGGCTTTTTGTGTTTATCTTGAAGCTGTGTCGGTTCTACCTCAGCTGCGGGTCATGCAGAACACTAAGATTGTTGAACCATTCACAGCACACTATGTTTTTGCACTTGGAGTTGCAAGGTTCTTGAGCTGTGCACATTGGGTCCTCCAGGTATTTGATACTCGTGGTCATCTACTAACTGCATTGGGTTATGGATTGTGGCCTTCAATGGTACTTTTATCAGAAATTGTCCAAACCTTCATCCTGGCAGATTTTTGCTACTACTACATCAAGAGCATTTTTGGGGGACAACTTGTTGTTCGGCTTCCTTCAGGAGTGGTGTGA 819 0.4237 MKATKRPIYAVTKWLRRQPPKMKLFLATLLAFLALLFLRMVVHDHDNLFVAAELVHALGISLLIYKLAQEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLGTTLWVIYMIRFKLKSSYMDTKDNLAIYYVVIPCAVLSLLIHPTTRHHPINRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVFDTRGHLLTALGYGLWPSMVLLSEIVQTFILADFCYYYIKSIFGGQLVVRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00262 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu07g00262 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu07g00262 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu07g00262 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu07g00262 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu07g00262 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR-LIKE PROTEIN 1 271 - -
Tsu07g00262 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Tsu07g00262 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00262 Tsu-Chr7 2012012 2014961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00262 1 272 Miscellaneous Gene Families AT4G38790 79.121 2.33e-163 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00262 - K10949 gmx:100787747 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00262 07 2012012 2014961 Tsu07g00262 07 2012012 2014961 ECH