Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00246 ATGCATCAAGGAGATTACACCTCCGCTCCATACTATCAATTCCCTCATATGCAGCAAAACCCCAACCCAATCCCCAACCCTACACCACCTCCTCAATCCGATCCAATTCCGAACCACTACGCTTCTGCACCTCCTTTCACTCCCAATTACGATTATTCCAATTATTCTCCTTACCCTCCTCATAATCCCGAACCTGTTCCTTCTTCCAACCCTAATTTCAATCCTACCTTCGAATCCAATCCTCCTTATCAACAACCACCGTCACAGCCCTATTATCCACCCTACGATCAACATCATACCGCTCCAAATTATGCATCtcctaaccctaaccctaatccCATTTCCATTCCCAATTCATCGCTGTACAATTCGGCACCGTATCCCCACTCAGCATCTTCGGTTCCTCCGATTCCGTCATACGAAAGTCAATACGAGAATCCGGTGAAATCCGATTACGGTGCTGGTGCTGCTGCTGGTGCTTATTTTGATGACAGGTATGGAAGTTTTAATCGGAGAAGTTCTGATTTGGGATCCGAATTGTATGGTACGCGTCATGATGGTGGTTTGTCTAGGTATGACTCCGGTGGTAGTGTTGGCGGTGGTGGTGATGAAGGTTATGGAGATGGAGTGTATGCTTATCAAGGGGGAAAAGTTGAACCGTATGGTGCACGTGGTACGGCTCCTAAATCTTCCACTTGGAATTCGAATTCGTCGTCAAACTCGACTCCTTCTTTTGATGATTTTGGAAGGCCGATTACTTTTCCGAAAGAATCTTCGGTGCCAAGTAAGATTGTGAAAGCTGTGCCGAAGGTTGATACACAAGAAGATGCCAAAAGTGGGGTGCAAAAGTTTCGTGTCAAGCTGTTGGCAGAGAGTGGTGGTCAGAGCACAATGGATGTTCTCTGCCAGGTTGGTTTGGATGGACTTCGCATGCTAGATCCAAATACCAGTCGGACATTGAGAATATATCCTCTTGAGAACATAACAAGATGTGATAGATTCGATTCATCCACCTTTGCCTTTTGGTCGAAGAGCCCTGTAGACATTGAGCCAAGACGAATTAGATTGCAATCTAATAGTTACACTACCAACACACTTTTGGATACAGTGACTGCTGCGACCATACAGTTCAAGGAAATGGGTGGCAGTAGGAGGCCTGCTGAATCATTGAAAATTAATGAACAGACTACCGAAAGAAAGAAAGGCCTCGGTGATTGGATGAATATCATCAAACCTGCCAATGAAGAGAAAGATCATTGGGTCCCAGATGAAGCAGTCTCAAAATGTACCGCATGTGGCACTGATTTTGGGGCTTTTATACGCAGGCATCACTGTAGGAACTGTGGTGATATTTTCTGTGACAAATGTACACATGGTAGAATTGCTCTAACTGCTGAAGAGAATGCTCAGCCAGTACGAGTTTGCGACCGATGCATGGCCGAAGTGACTCAGAGGCTGACTAGTGCTAAAGAGTCATCAAATAAACCTATTTTGCAGAGTCACGAGGATCTTGCTCGGAAACTTCAGGTGAACATTTGGGGCATCCTGTACTATTTGTGTCTTGGTTTTTCTTGCCCATGGAAGGcgttaaatttgtttatttaa 1605 0.4417 MHQGDYTSAPYYQFPHMQQNPNPIPNPTPPPQSDPIPNHYASAPPFTPNYDYSNYSPYPPHNPEPVPSSNPNFNPTFESNPPYQQPPSQPYYPPYDQHHTAPNYASPNPNPNPISIPNSSLYNSAPYPHSASSVPPIPSYESQYENPVKSDYGAGAAAGAYFDDRYGSFNRRSSDLGSELYGTRHDGGLSRYDSGGSVGGGGDEGYGDGVYAYQGGKVEPYGARGTAPKSSTWNSNSSSNSTPSFDDFGRPITFPKESSVPSKIVKAVPKVDTQEDAKSGVQKFRVKLLAESGGQSTMDVLCQVGLDGLRMLDPNTSRTLRIYPLENITRCDRFDSSTFAFWSKSPVDIEPRRIRLQSNSYTTNTLLDTVTAATIQFKEMGGSRRPAESLKINEQTTERKKGLGDWMNIIKPANEEKDHWVPDEAVSKCTACGTDFGAFIRRHHCRNCGDIFCDKCTHGRIALTAEENAQPVRVCDRCMAEVTQRLTSAKESSNKPILQSHEDLARKLQVNIWGILYYLCLGFSCPWKALNLFI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00246 534 PANTHER PROTEIN FREE1 1 509 IPR045893 GO:0036258|GO:0043130
Tsu07g00246 534 CDD PTB 265 341 - -
Tsu07g00246 534 PANTHER PROTEIN FREE1 1 509 - -
Tsu07g00246 534 SMART fyve_4 415 484 IPR000306 GO:0046872
Tsu07g00246 534 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 409 488 IPR013083 -
Tsu07g00246 534 SUPERFAMILY FYVE/PHD zinc finger 418 489 IPR011011 -
Tsu07g00246 534 Pfam FYVE zinc finger 419 483 IPR000306 GO:0046872
Tsu07g00246 534 SUPERFAMILY PH domain-like 282 346 - -
Tsu07g00246 534 MobiDBLite consensus disorder prediction 1 120 - -
Tsu07g00246 534 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 423 483 IPR017455 -
Tsu07g00246 534 MobiDBLite consensus disorder prediction 20 42 - -
Tsu07g00246 534 MobiDBLite consensus disorder prediction 222 249 - -
Tsu07g00246 534 MobiDBLite consensus disorder prediction 227 247 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00246 411 484 EF-hand Containing Proteins AT3G14270 37.500 4.81e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00246 - - gmx:100794840 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00246 07 1898672 1905365 Tsu07g00246 07 1898672 1905365 ECH