Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00231 ATGGATTCCCTTTCTCTCTTTTGTACCGGAGCTCTTCTTGCCGGCGGCCTCTACTGGTTCGTCTGTGTGCTGGGTCCTGCCGAACGAAGAGGCAAACGTGCCGCCGATCTATCCGGCGGTTCAATCTCCGCCGAACAAGTACAAGACAGTTACAAACAATACTGGTCTTTCTTCCGTCGCCCAAAAGAGATCGAAACCGCTGAAAAAGTCCCAGATTTCGTCGATACTTTCTATAATTTAGTCACCGATATCTATGAATGGGGTTGGGGTCAATCCTTTCATTTTTCACCCTCCATTCCCGGAAAATCTCACCGTGACGCCACACGCCTCCATGAAGAAATGGCCGTGGATCTGATTGAGGCTAAATCTGGTGACAAAATTCTCGACGTTGGATGTGGTGTTGGTGGACCTATGAGAGCCATCGCAGCTCACTCACGCGCAAACGTTGTTGGAATCACAATCAACGAGTATCAAGTGAATCGTGCAAAAATTCACAACAAAAAAGCTGGTCTCGATTCTCTATGTGATGTTGTTTGTGGTAATTTTCTTGAGATGCCGTTTCCCGATAACACCTTCGACGGCGCGTATTCAATCGAAGCCACCTGCCACGCGCCCAAGCTAGACGAAGTTTACGCcgaaatttttagggttttgaaaCCTGGTGCGCTTTATGTTTCATATGAATGGGTTACTACCGATAAATTCAAAGGTGAAAATCCTGAACATGTTGAAATTATTCAAGGGATTGAAAGAGGTGATGCTTTACCTGGCTTAAGAAGCTACGCTGATATAGCTGAAACGGCCAAGAAAGTTGGTTTTGAGGTTGTTAAGGAACGAGATCTGGCTTTACCACCAGCTGAGCCGTGGTGGAGCCGACTGAAAATGGGTCGGCTTGCTTATTGGCGTAACCATGTTGTTGTAACGGTTCTTTCTGCTTTGGGAATAGCGCCTAAAGGAACCGTTGATGTTCATGAGATGCTTTTCAAGACTGCTGACTATTTGACCAGAGGGGGTGACACTGGAATTTTCTCACCTATGCACATGATTCTCTGCAGAAAACCTAAAGAACAAGAAAATTGA 1080 0.4537 MDSLSLFCTGALLAGGLYWFVCVLGPAERRGKRAADLSGGSISAEQVQDSYKQYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIEAKSGDKILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRAKIHNKKAGLDSLCDVVCGNFLEMPFPDNTFDGAYSIEATCHAPKLDEVYAEIFRVLKPGALYVSYEWVTTDKFKGENPEHVEIIQGIERGDALPGLRSYADIAETAKKVGFEVVKERDLALPPAEPWWSRLKMGRLAYWRNHVVVTVLSALGIAPKGTVDVHEMLFKTADYLTRGGDTGIFSPMHMILCRKPKEQEN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00231 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 354 IPR029063 -
Tsu07g00231 359 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Tsu07g00231 359 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 1 356 - -
Tsu07g00231 359 CDD AdoMet_MTases 126 230 - -
Tsu07g00231 359 PANTHER - 1 356 IPR044625 GO:0008168|GO:0032259
Tsu07g00231 359 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Tsu07g00231 359 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Tsu07g00231 359 Gene3D Vaccinia Virus protein VP39 44 309 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00231 Tsu-Chr7 1729350 1731668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00231 116 280 Acyl Lipid Metabolism Gene Families AT1G73600 29.091 4.23e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00231 K08242 - gmx:100804517 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00231 07 1729350 1731668 Tsu07g00231 07 1729350 1731668 ECH