Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00229 atgagtAGGGGAATTATGGAGAAATTGAATTTGTATGGTTTGAGCCATCTCTTCGTTACTGTTTTTCTTCATAACTTATCGACATTCATGGTGGTACCGGCCATCACCGATGTCACAATGGCTGCGCTTTGTCCCGGACAAGATGAATGTTCACTTGCCATCTACCTTACTGGTTTTCAACAAGCGATGATAGGATTGGGAACCCTTGTGACAATGCCCCTCTTGGGTAGTCTCTCCGATAAGTATGGGAGGAAAGCTATTCTCACACTTCCTATGACCCTCATGATTATTCCCTTGGGAATATTAGCTTACAGTAGGACAAAAACATTCTTCTATGTGTATTACGTGTTTAGGATCATCATTTTCATGATCTGTGATGGATGCATTCCTTGCCTCGCTCTAGCTTATGTTGCAGATAATGTTCCTGAAGGGGGGAGAAGTACTGCCTTTGGAATTCTTTCAGGGATTGGATCCTCTGCTTTTGTGTTTGGTACTCTAGCAGCTCGTTTTCTATCTACTGCTCAAACTTTTCAGGTTTCCACTTTTGCTGCAATGCTCGGAGCAGTTTACATGCAAATCTTCCTTCGAGATTCAGTCATAGATCAAAACAACGTCCTTTGTACCCCAATCATTTCACATGAGAAGGGGACAGTTTCTAAAATAAATGGTAAATCGAAATCCAACATGTCGATGTTGAAAGCATTGCGTTCTTTGCAGGATCTAACATCTTTCCTTAATAGTAGCAAGATTATCACTCAAGCAGCAATTGTTGCATTCTTCAGTAACCTTGCAGATGTTGGCTTTCATGGTTCAATGATGTATTACTTAAAGGCTCAGTTTCATTTTGATAAGAACCATTTTGCTGATTTAATGATCATTTCTGGTATTGCAGGGACTGTATCACAGCTTTTGCTTATGCCTATTTTCGCTCCTGCTTTGGGTGAGGCAAGGCTGCTTTCAATTGGactattttttcatttcttatatATGTTCATTTACAGCATAGCATGGTCCTCTTGGGTTCCTTATGCTGCTGCAATGTTctcaattttgtttgttttttcacAACCATGTATAAGAAGTATTGTGTCTAAACAAGTTGATCCCCACGAGCAGGGAAGAGCTCAAGGTTGCATCTCAGGCATATGTTCAATTGCTCATATTGTATCTCCCTTGGTTTTCTCTCCATTAACGGCTCTATTTTTATCTGAAAGGGCACCTTTTAATTTTCCTGGCTTCAGTATATTGTGTATTGGAATTGCTTCGatgGTATCTTTTTTTCAAAGCATGATGCTCAGAGTGGATCCTCCCATTTTGAGTTAG 1323 0.3908 MSRGIMEKLNLYGLSHLFVTVFLHNLSTFMVVPAITDVTMAALCPGQDECSLAIYLTGFQQAMIGLGTLVTMPLLGSLSDKYGRKAILTLPMTLMIIPLGILAYSRTKTFFYVYYVFRIIIFMICDGCIPCLALAYVADNVPEGGRSTAFGILSGIGSSAFVFGTLAARFLSTAQTFQVSTFAAMLGAVYMQIFLRDSVIDQNNVLCTPIISHEKGTVSKINGKSKSNMSMLKALRSLQDLTSFLNSSKIITQAAIVAFFSNLADVGFHGSMMYYLKAQFHFDKNHFADLMIISGIAGTVSQLLLMPIFAPALGEARLLSIGLFFHFLYMFIYSIAWSSWVPYAAAMFSILFVFSQPCIRSIVSKQVDPHEQGRAQGCISGICSIAHIVSPLVFSPLTALFLSERAPFNFPGFSILCIGIASMVSFFQSMMLRVDPPILS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00229 440 Gene3D MFS general substrate transporter like domains 14 428 IPR036259 -
Tsu07g00229 440 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 13 434 - -
Tsu07g00229 440 ProSiteProfiles Major facilitator superfamily (MFS) profile. 13 437 IPR020846 GO:0022857
Tsu07g00229 440 SUPERFAMILY MFS general substrate transporter 17 425 IPR036259 -
Tsu07g00229 440 CDD MFS_SLC46_TetA_like 17 431 - -
Tsu07g00229 440 Pfam Major Facilitator Superfamily 17 391 IPR011701 GO:0022857|GO:0055085
Tsu07g00229 440 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 13 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00229 Tsu-Chr7 1714847 1721072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00229 13 436 Organic Solute Cotransporters AT2G16990 45.853 8.62e-121 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00229 - - gmx:100789917 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00229 07 1714847 1721072 Tsu07g00229 07 1714847 1721072 ECH