Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00219 ATGGGTGTAGTAGATTGGAGTGAGTTACCACAAGATATCATTGATTCAATCTCCAAGAGATTAACGATCTACCCCGATTATCTCCGATTTCGATATGTATGTAGCAGTTGGAATTCATCGGTTCCCAAAATCCCACTCCATCTACCACCTCAACTCCCATGGCTCATGCTTCATCGCAATTCCTTCTTCGACCTCTCCACTAACAAAATCCACCGTCTCAATCTTCCTTTTTCGGGCCGTTTCTGTGGTTGTTCTCATGGCTGGCTCGCTGTCATTCTCAAACAAACCTCTGAAGTCACTCTTCTTAACCTATGA 315 0.4413 MGVVDWSELPQDIIDSISKRLTIYPDYLRFRYVCSSWNSSVPKIPLHLPPQLPWLMLHRNSFFDLSTNKIHRLNLPFSGRFCGCSHGWLAVILKQTSEVTLLNL 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00219 104 Pfam F-box domain 6 48 IPR001810 GO:0005515
Tsu07g00219 104 Gene3D - 5 45 - -
Tsu07g00219 104 PANTHER OS07G0183000 PROTEIN-RELATED 4 103 - -
Tsu07g00219 104 PANTHER F-BOX PROTEIN SKIP23-LIKE 4 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00219 Tsu-Chr7 1636941 1637255 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00219 - - mtr:MTR_3g114970 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00219 07 1636941 1637255 Tsu07g00219 07 1636941 1637255 ECH