Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00176 ATGGGCGAGGTAtctgaaacaacaacaactacGACGACGTCGacgaagaggaagaagaaaggtCGTCCATCTCTTTTGGATCTTCAAAAAAGATctatcaaacaacaacaaaaacaacttcaaaATCTCGATCCCCCTCATCATCATTCTAATGATGATGACGACGAACGCAAACTCAAGAAACAAAAACTCTTAATCGGTTTGAATTCTCATCTCCAAAACCCCACCACATTACTCCCCAATTCTCACTCTACCGGATCACATCAAAACGTCGTCGTCGATGGAAAGGTTCCGAAAGCGACTGACAGTAAACATGGTTCGCAGGTTGTGTCCGGTCCCACTACACCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGACTTCAAAAAAAGGACACACATGGGGTCTTCTCTGAGCCTGTGGATCCAGAAGAGTTACCTGATTATCATGATATTATTAAAGACCCAATGGATTTTGGAACTATAAGGAAGAAATTGGATGGGGATGGAGGATTATATATCAGCCTTGAACAGTTTGAGAATGACGTGTTCTTGGTATGCTCTAATGCAATGCAATACAATTCACCAGATACTATTTACCATCGACAGGCCCGGGCAATGCAAGAGATAGCAAGGAAGGACTTTGAGAATCTGAGACAAGatagtgaggatgatgatgacgatgataatgataatgatagtGAACCACCACCACCCAAAATGCAGAGGGGAAGGCCACCAGGCAAGCACACAAAAAAGTCATTGGGCATGTCTCCAATAGAGCATGTTGCTCCTGAATCTTCCAATGATGCAACTCTTGCTTCTGGTGGGGATATTGCTAGTGGCTCCAATGGTTATAATCTAAGAAAAGTAGTAAGCAAGTTTCAGTCTACAGATTCATCAACCAGGGCTCTCCAATACAACAGTGGTGGCTATACAAATTGGACGTCTGAGTGGGAGAATGAATTTCCAGCTTCTGTTTTAAAAGCTGTCTCAAGGTATGGAAAGAAGCAGTACACGGTTGATGAGACCAGGCGTGACACTTACAGAAATCCAGTGGCTGTAGGAAATGAAACACCAGTATTGACCGCATTTGAAGATAATTTCAAGCAACTTCTTGCAGTTGGTTTACATGTGAAGCACAGCTATGCAAGAAGCCTAGCCCATTTTGCTGCGGACCTTGGTCCTGTTGCTTGGAAGGTTGCTGCTAGGAAAATCAGCAGTGTTTTGCCACCAGGACATGAATTCGGTCCTGGATGGGTATCTGATGATGATATGTCACAGAAGCAGCACGTCGTGGTTCGTGATGGGAGAAATTCAGACCCGCCTGTTACAGAGGATTATAGAAGTAGATTTTCTTCTCCATCAAGAACATTCTCTCTTGCAAATACATCATGCTTGCAAAGTGGAGACACGGTAATAAATAGAGACCAGAGTTACCAAAACGAAATGAATTCAGGCAGCAGTGTTAGTGGTGGGAATGAATCCATGATTCACGGGAGGATTCAGCAGGAACCCATGGCGCACTCCGATGATTTTGGTTCTAATGGTCGGTTACGCTCTAATTTTTCACCTCAAATGACGATGGTAAGACTTGCTGACATAACCGGGTCTTCAAATGCCGGTAATGCTCCTCAAATGGTCGACATGGATTCCGTAAACAGTCTTTCCGGTCAAATTGCACCTACAAATATTAATCCGACAGGTCTCAAAGctcaattttttaacaagtcGAGTCAGTCAGATTCCAGTAATTTATCAGCTCCGGAATCTGGATTTGATCCGCAAAGATTTTCTCAAGGGCTTGCTGGAAAATCATCTTGGCAAGGATTGGAAGTTCCTACTAAACAGAATTCTTTTTCACCTGGTAATGACTTGAATGCGTTGATGGGGGCAACAAATTCTCACAGTTCCAATGTGGAGACTGGCCCTCAGCTGCAGCCAAATCTTGCATTGCAGCTCTGA 1971 0.4125 MGEVSETTTTTTTSTKRKKKGRPSLLDLQKRSIKQQQKQLQNLDPPHHHSNDDDDERKLKKQKLLIGLNSHLQNPTTLLPNSHSTGSHQNVVVDGKVPKATDSKHGSQVVSGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYHDIIKDPMDFGTIRKKLDGDGGLYISLEQFENDVFLVCSNAMQYNSPDTIYHRQARAMQEIARKDFENLRQDSEDDDDDDNDNDSEPPPPKMQRGRPPGKHTKKSLGMSPIEHVAPESSNDATLASGGDIASGSNGYNLRKVVSKFQSTDSSTRALQYNSGGYTNWTSEWENEFPASVLKAVSRYGKKQYTVDETRRDTYRNPVAVGNETPVLTAFEDNFKQLLAVGLHVKHSYARSLAHFAADLGPVAWKVAARKISSVLPPGHEFGPGWVSDDDMSQKQHVVVRDGRNSDPPVTEDYRSRFSSPSRTFSLANTSCLQSGDTVINRDQSYQNEMNSGSSVSGGNESMIHGRIQQEPMAHSDDFGSNGRLRSNFSPQMTMVRLADITGSSNAGNAPQMVDMDSVNSLSGQIAPTNINPTGLKAQFFNKSSQSDSSNLSAPESGFDPQRFSQGLAGKSSWQGLEVPTKQNSFSPGNDLNALMGATNSHSSNVETGPQLQPNLALQL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00176 656 SMART bromo_6 112 222 IPR001487 GO:0005515
Tsu07g00176 656 MobiDBLite consensus disorder prediction 1 57 - -
Tsu07g00176 656 Pfam Bromodomain 126 207 IPR001487 GO:0005515
Tsu07g00176 656 MobiDBLite consensus disorder prediction 29 44 - -
Tsu07g00176 656 Gene3D - 117 237 IPR036427 GO:0005515
Tsu07g00176 656 SUPERFAMILY Bromodomain 114 227 IPR036427 GO:0005515
Tsu07g00176 656 MobiDBLite consensus disorder prediction 435 458 - -
Tsu07g00176 656 ProSitePatterns Bromodomain signature. 136 195 IPR018359 -
Tsu07g00176 656 PANTHER BROMODOMAIN-CONTAINING PROTEIN-RELATED 12 490 - -
Tsu07g00176 656 MobiDBLite consensus disorder prediction 579 628 - -
Tsu07g00176 656 MobiDBLite consensus disorder prediction 71 90 - -
Tsu07g00176 656 PRINTS Bromodomain signature 134 147 IPR001487 GO:0005515
Tsu07g00176 656 PRINTS Bromodomain signature 148 164 IPR001487 GO:0005515
Tsu07g00176 656 PRINTS Bromodomain signature 184 203 IPR001487 GO:0005515
Tsu07g00176 656 PANTHER BROMODOMAIN CONTAINING PROTEIN 12 490 - -
Tsu07g00176 656 MobiDBLite consensus disorder prediction 221 282 - -
Tsu07g00176 656 ProSiteProfiles Bromodomain profile. 131 203 IPR001487 GO:0005515
Tsu07g00176 656 CDD Bromodomain 119 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00176 Tsu-Chr7 1314021 1318804 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00176 K22184 - gmx:100783010 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00176 07 1314021 1318804 Tsu07g00176 07 1314021 1318804 ECH