Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00174 ATGATCAACTCAACTatggaagaagagaagaagaaagtgatgCCACTCTTCACCCCATACAACAtgggaaattttaatttatcccACAGGATAGTGCTTGCACCGTTAACAAGAACAAGGTCATACAATTCTGTGGCTCAGCCACATGCTGCTCTCTATTATTCTCAAAGAACAACAAAGGGTGGTTTCTTGATTGGGGAAGCCTCAGGGGTGTCAGACACTGCTCAAGGGTATCCAAATACACCTGGTATTTGGACAAGAGAACAAGTTGAAGCATGGAAACCAATTGTTGAAGCTGTTCATGAAAAAGGAGGCATATTCTTTTGTCAACTTTGGCACGCTGGAAGAGTATCCAACTATGGTTACCAACCAGATGGGCAACCTCCAATATCAAGCACAGACAAGGCACTACAAAAGGAAGGAAGTAGCACTAAATACCCACCTCCTCGACGTCTCAGAACCGATGAAATCCCAAAGGTTGTCAATGACTTCAGAATGGCTGCCAAAAATGCTATAGATGCAGGTTTTGATGGAGTGGAGATACATGGAGCTAATGGTTACTTGCTTGATCAATTCCTAAAAGACAAAGTCAATGACAGAGATGATGAGTATGGAGGGAGCTTAGAAAACCGTTGTCAATTCCCACTAGATGTTGTGAAAGTGGTTGTTGATGAGATCGGAGCTGACAAAGTTGGTGTTAGACTTTCTCCTTTTGCTGATTATTGTGGTTGTGGAGACTCTAACCCTCAAGCTTTGGCCATTTACATGGCTCAATCATTGAGTGAATTGGGTATTCTCTACTGTCATGTCATTGAACCTAGGATGTGCACCATGTTTGAAAAACGTGACACAAATGTGTCCTTAATGCCTATGCGAAAGGCCTTTGATGGAACATTTATTGTTGCTGGTGGATACAATAAGAGTGAAGGAAACAATGTGTTGGACAATGATGGTGCAGATTTGGTAGCTTATGGACGATTGTTTCTGGCAAATCCAGATCTACCTAGAAGATTTGAGTTAGATGCTCAATTGAACAAGGCTGATAAGAGCACTTTTTACACCAGTGATCCTGTTGTTGGATATACTGATTATCCATTTCTTGAAAATGCTAGCTAG 1116 0.4005 MINSTMEEEKKKVMPLFTPYNMGNFNLSHRIVLAPLTRTRSYNSVAQPHAALYYSQRTTKGGFLIGEASGVSDTAQGYPNTPGIWTREQVEAWKPIVEAVHEKGGIFFCQLWHAGRVSNYGYQPDGQPPISSTDKALQKEGSSTKYPPPRRLRTDEIPKVVNDFRMAAKNAIDAGFDGVEIHGANGYLLDQFLKDKVNDRDDEYGGSLENRCQFPLDVVKVVVDEIGADKVGVRLSPFADYCGCGDSNPQALAIYMAQSLSELGILYCHVIEPRMCTMFEKRDTNVSLMPMRKAFDGTFIVAGGYNKSEGNNVLDNDGADLVAYGRLFLANPDLPRRFELDAQLNKADKSTFYTSDPVVGYTDYPFLENAS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00174 371 PANTHER 12-OXOPHYTODIENOATE REDUCTASE-LIKE PROTEIN 12 369 - -
Tsu07g00174 371 Gene3D Aldolase class I 2 371 IPR013785 -
Tsu07g00174 371 SUPERFAMILY FMN-linked oxidoreductases 15 368 - -
Tsu07g00174 371 PANTHER NADH OXIDOREDUCTASE-RELATED 12 369 IPR045247 GO:0010181|GO:0016491
Tsu07g00174 371 MobiDBLite consensus disorder prediction 124 140 - -
Tsu07g00174 371 MobiDBLite consensus disorder prediction 123 152 - -
Tsu07g00174 371 Pfam NADH:flavin oxidoreductase / NADH oxidase family 16 341 IPR001155 GO:0010181|GO:0016491
Tsu07g00174 371 CDD OYE_like_FMN 15 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00174 Tsu-Chr7 1303508 1305460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00174 1 371 Acyl Lipid Metabolism Gene Families AT1G76690 65.957 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00174 K05894 - gmx:100790284 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00174 07 1303508 1305460 Tsu07g00174 07 1303508 1305460 ECH