Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00169 atgttttCTGAAAGATTGGGGGTAGAAGAATCTTGTTGTCAAGAAGATTTTCACGGTTTGAGTGTGTCAAAGCGTCTTGTGAGGAGTGTTAGCCAGAAGTTGAGGAAGAAGAATAATAACAGAAGTTTaggtgaagaagaagatgaagacggTGATGATGTAAATGGAGTTTCTTTGAAATGTCTAACATTGTATGGTCGGGGTGGGGGATGCAAGGTTGGTGCTGATACTGGTGATGAATTAGGGGATTCGAGCAATAGAAGGAGATCTAGTTCTGGTGAAGAAGGTAAGGGATATAAACCGGTTTGTGGCCCTCAAGATACTGCTGTTGTAGATTGCTTTTCATATGGGGTGAGGGATAGGTTTTGGAGGAGACATCATCATCATAGAAAGAATTCTGAACTTGATGAATCGAtaacaacaaacaataaaatgaaTATCTTTCTTCCAGATGATATTCTTGAAATGTGTTTGGTGAGGCTTCCGTTGACAAGTTTGATGAATGCTCGACTTGTTTGTAAAAAATGGAGGTCCTTGACCACTACTCCTAGATTCCTCCAAATGAGAAGGGAGGGTTTGTATCAAAATCcatggttgtttttgtttggtgcTGTTAAAGACGGCTTTTGCTCAGGTGAGATACATGCGTTGGATGTGTCTCAGAATCAATGGCATAGGATCGATGCTGGTTTTCTCAGGGGAAGGTTCTTGTTCTCTGTTGCTAGTGTACAAGATGATATCTTCATTGTTGGAGGATGTTCTAGCTTGACTAACTTTGGGAAAGTGGATAGGAGCTCATTCAAGACGCACAGAGGAGTGCTTTCATTTAGCCCCTTGACAAAATCTTGGCGTAAAATACCATCTATGAAATATGCTAGATCAATTCCTATACTAGGAGTCTTTGAAGTCAGTTTGGATTTTCCAAGTTGTCAAAGTCATCAAAGTCGTCAGGATAGACGTTTTCCAAGGTCAAGGATTGGTGGGGTTTCAGATGTCTATGAGGATCCTCATAAGCTTTCAATGAGACGTCATTGCAGATCTACCATTAATGAGACCGAGGCTTCAACTTTGCCTAGCAGAAAGGCGCATAAATTGCTGAAACAAATAAGTGATCTTTCAAGCTCAAAGAGTAGTAGAAGATTTTTGTTGATAGCTGTAGGTGGTCTGGGATCTTGGGATGAACCTCTGGACTCTGGAGAAATATATGATTCTGTATCCAATAAATGGACTGATATCGCAAGATTGCCTTTTGATTTTGGGGTTGCTTGTTCTGGAGTTGTATGTGGCAAGATGTTTTTTGTTTACTCTGAAACGGACAAGCTTGCCGCATATGACATAGAACGGGGTTTCTGGATTGCAGTTCAAGCCACTCCGATCCCGCCCCGTGTACATGAGTACTACCCCAAACTTGTATCTTCAAATAGCCGTCTATTCATGCTCTCCGTGTCTTGGTGCGAAGGTGATGGTCAAATTGGGCGGCGAAACAAGGCTGTTAGAAAATTATGGGAGTTAGATCTTATGTATCTTACCTGGACTGAAGTCTCAGTGCATCCTGATGCCCCAATGGATTGGAATGCTGTATTTGTGGCAGACAAAAACTTGATTTTTGGAGTGGAAATGTTCAAAATATTTGGTCAAGTGTTAGATTTTTTCACTGTATGTGATGTGACTGATATGTCAAACTGGAATCATATTTCAAGGAATCATGTCACTCATGAGCTGGATGGTTCATCGTGCGTGACCAAATCTGTGGCAGTGCTGCACCTTTAA 1770 0.3983 MFSERLGVEESCCQEDFHGLSVSKRLVRSVSQKLRKKNNNRSLGEEEDEDGDDVNGVSLKCLTLYGRGGGCKVGADTGDELGDSSNRRRSSSGEEGKGYKPVCGPQDTAVVDCFSYGVRDRFWRRHHHHRKNSELDESITTNNKMNIFLPDDILEMCLVRLPLTSLMNARLVCKKWRSLTTTPRFLQMRREGLYQNPWLFLFGAVKDGFCSGEIHALDVSQNQWHRIDAGFLRGRFLFSVASVQDDIFIVGGCSSLTNFGKVDRSSFKTHRGVLSFSPLTKSWRKIPSMKYARSIPILGVFEVSLDFPSCQSHQSRQDRRFPRSRIGGVSDVYEDPHKLSMRRHCRSTINETEASTLPSRKAHKLLKQISDLSSSKSSRRFLLIAVGGLGSWDEPLDSGEIYDSVSNKWTDIARLPFDFGVACSGVVCGKMFFVYSETDKLAAYDIERGFWIAVQATPIPPRVHEYYPKLVSSNSRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWTEVSVHPDAPMDWNAVFVADKNLIFGVEMFKIFGQVLDFFTVCDVTDMSNWNHISRNHVTHELDGSSCVTKSVAVLHL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00169 589 Gene3D - 358 574 IPR015915 GO:0005515
Tsu07g00169 589 SUPERFAMILY Kelch motif 383 537 IPR015915 GO:0005515
Tsu07g00169 589 Gene3D - 161 302 IPR015915 GO:0005515
Tsu07g00169 589 SUPERFAMILY Kelch motif 196 300 IPR015915 GO:0005515
Tsu07g00169 589 MobiDBLite consensus disorder prediction 33 52 - -
Tsu07g00169 589 MobiDBLite consensus disorder prediction 81 95 - -
Tsu07g00169 589 SUPERFAMILY F-box domain 149 211 IPR036047 GO:0005515
Tsu07g00169 589 SMART fbox_2 149 189 IPR001810 GO:0005515
Tsu07g00169 589 SMART kelc_smart 246 303 IPR006652 GO:0005515
Tsu07g00169 589 SMART kelc_smart 382 429 IPR006652 GO:0005515
Tsu07g00169 589 ProSiteProfiles F-box domain profile. 143 189 IPR001810 GO:0005515
Tsu07g00169 589 PANTHER OS09G0555300 PROTEIN 1 589 - -
Tsu07g00169 589 Pfam Kelch motif 237 293 - -
Tsu07g00169 589 Pfam F-box domain 149 185 IPR001810 GO:0005515
Tsu07g00169 589 PANTHER OS09G0555300 PROTEIN 1 589 - -
Tsu07g00169 589 MobiDBLite consensus disorder prediction 76 101 - -
Tsu07g00169 589 Pfam Kelch motif 383 415 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00169 Tsu-Chr7 1263105 1265625 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00169 - - ccaj:109802378 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00169 07 1263105 1265625 Tsu07g00169 07 1263105 1265625 ECH