Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00156 atgaagttgaatcTGTTTTCGTTTCTTTTCACATTTACCATTCTATCCTCCCATGTCCTCTCCATTTCCGATCTCATCCTCACCAAGGTTGACCGTCGTATTGATCTGTCAACACAAATTGTTCGCACCACTACTACACTAAAGGTAGAGAATGCAGGGTCTGATATTGTATCAGAAATCTTGTTGCCCTTTCCTGAAAACCATGCAATTCACTTGGCATACTTGTCGGCAACACTTAATGAAGGAAGAGGAAAGGCGAAACCGTCTTCTGGTGCTGGTTTACCTTACGATGAAGTTGTCAGCCCTAAAGATTTTCCCAATTCCTTGAAAGTTTACTCCGTAACTTTACCTAAAGGCCTTGGGAAGGGAGATAGTCTGACTTTGGATGTCTTGGCTGTTTTCACCCACATATTGCAACCATTTCCAGAGAAAATTACTCAAGCTGACATCCAGCTTCTGCTTTTTCAAGAGACTGCACACTATCTTACTCCTTATCCTGTAAAGGTTCAATCACTCGTTGTTAAATTACCTGATGCAAGAATAGAGTCCTACACAAAACTGGAAaagacaaaacttcagggatcTGAATTGAAATATGGTCCATATGAGAATCTTCCTAGATTTTCATACTTGCCAATGGTTATCCACTTTGAGAATAACCAGCCTTTTGCCGTTGCTAAAGAGTTGGTGCGGGAGATTGAGATATCTCATTGGGGCAATGTGCAGATCACAGAGCATTATAATCTTGTTCATGGTGGTGCACAGAGCAAAGGAGAATTTTCCAGGCTTGACTACCAGGCCAGGCCGTATGTAAGAGGTGCATCGGCCTTTAGGCGTCTTGTTGCCAAGCTGCCACCAAGAGCTCATTCTGTGTACTACAGGGATGAAATCGGCAACATTTCCACTTCTAATTTGTGGGGTGACTCAAAAAAGACAGAACTGGAGATCGAACCTAGGTACCCAATTTTTGGTGGCTGGAAAACTGCCTTTACCATTGGATATGGGTTGCCACTTCAGGACTTCTTATTTGGAATCGATGGAAAGCGCTTCCTTAATATCTCTTTTGGTTCCCCCATTAATGAGTTGGTGATTGACACTCTTATTGTGAAGGTTGTTTTACCAGAGGGTTCAAAAGATATTTCACCATCTGTTCCATTTCCTGTGAAACAAAGCCATGAGACAAAGTTTTCTCACTTGGATATTGCTGGTAGACCTGTTGTTGTGCTGGAGAAGAACAACGCTGTGCCTGAGCATAATGAGCATTTTCAGGTCTATTATAAGTTCAACCGTCTTTCTATGCTCAGGGAGCCATTGATgttgatttttgggtttttctttctatttgttGCCTCCATTGTCTACATGCATGCAGACTTGTCAATCTCCAAGACTTCTGCATCTTATTTGGCAAAGATCCAATGGGAAGAGGTTCAAGCAACTATTCGTCAGGTCCATACTATCATTAGCCGTTGCTTAACAACACATGACAAGCTAGAAGCATCATTACGTGATCTTTCTAGGACAGGAGATATTCAAGGATGTAAAGCAACCCGAAAATCAGTTGATAGCTCGTTGAAAGAGCTCACGAAAGAGTTGAAATCGCCAGTGGCATTCTTGCAATCTTCACCACAAGCCGCACAAATATTACCCAAGGTGGAGGAAGTTATTGCTAAGGAGAGAGATTTGCAGGAGAGACTTATGGCAAAACACTCTACTGTTGTTGACTGTTATGAGAAGAAGTTAGGAGGAAGGGAAATCGAGAATCGGGTTGCTTCACATCAGCAGAAAATTACAGCTTTGAGACAAGAGATTGACGATCTTATGGACTTGATCGATGAGATATGA 1845 0.4087 MKLNLFSFLFTFTILSSHVLSISDLILTKVDRRIDLSTQIVRTTTTLKVENAGSDIVSEILLPFPENHAIHLAYLSATLNEGRGKAKPSSGAGLPYDEVVSPKDFPNSLKVYSVTLPKGLGKGDSLTLDVLAVFTHILQPFPEKITQADIQLLLFQETAHYLTPYPVKVQSLVVKLPDARIESYTKLEKTKLQGSELKYGPYENLPRFSYLPMVIHFENNQPFAVAKELVREIEISHWGNVQITEHYNLVHGGAQSKGEFSRLDYQARPYVRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSNLWGDSKKTELEIEPRYPIFGGWKTAFTIGYGLPLQDFLFGIDGKRFLNISFGSPINELVIDTLIVKVVLPEGSKDISPSVPFPVKQSHETKFSHLDIAGRPVVVLEKNNAVPEHNEHFQVYYKFNRLSMLREPLMLIFGFFFLFVASIVYMHADLSISKTSASYLAKIQWEEVQATIRQVHTIISRCLTTHDKLEASLRDLSRTGDIQGCKATRKSVDSSLKELTKELKSPVAFLQSSPQAAQILPKVEEVIAKERDLQERLMAKHSTVVDCYEKKLGGREIENRVASHQQKITALRQEIDDLMDLIDEI 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00156 614 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 2 592 - -
Tsu07g00156 614 PANTHER RIBOPHORIN I 2 592 IPR007676 GO:0006486|GO:0016021
Tsu07g00156 614 Coils Coil 583 610 - -
Tsu07g00156 614 Pfam Ribophorin I 27 454 IPR007676 GO:0006486|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00156 Tsu-Chr7 1184935 1189369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00156 21 552 Miscellaneous Gene Families AT1G76400 67.293 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00156 K12666 - gmx:100817203 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00156 07 1184935 1189369 Tsu07g00156 07 1184935 1189369 ECH