Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00145 ATGGCGACGTCAACCCCAGACAGACCCGCCGAGCCTCCGTCATCCGCCTCAGAACCACCTCAACCGCAACCTCAAGTTCAAACTCAGCCCCCAATTTCTACTCCGCCTCCCGCAAAGCCACCACTAACACCGCCACCACCGAAACCAGGAGTTCCATTGCCAGACCCCAAATCATCTAGCGATGTCAGCTTAATCCTAATCCCTAGTCACTCAAGATGGTTCTCATGGGATTCCATTCACGAATGCGAGATTCGTAACATTCCCGATTCTTCTAAGAACCCTAGGGTTTACAAATACTACAGAAATTCCATAGTAAAGCATTTCAGATTCAATCCCAATAGAAAAATAACCTTCACCGATGTTCGAAAAACGCTCGTCGGCGACGTAGGTTCAATTCGAAGAGTCTTCGATTTTCTTGAAGCTTGGGGATTAATCAATTATCATCCTTCTTCTTCGCTTAGTAAACCCTTCAAATGGGAAGATAAAGACACCAAACCTGAATCAGGGTCGAATTTTACGGATTCTCCTTCTCCGGCGCCGGTCAAAGAAACCGCTAAGAGAATTTGCAGTGGCTGCAAAACTAACTGTGTCGTTGCTTGCTTTGCCTGTGACAAGAATGACATGACTTTGTGTGCGAGGTGTTTTGTTCGTGGAAACTATCGAATTGGTATGAGTAATACAGAGTTCAAGAGAGTGGAGATTAGTGAGGAGACAAAAACTGAATGGACTGAGAAGGAAACATTGAATCTTCTTGAAGCTATTACGAATTTCGGTGATGATTGGAAGAGGGTTTCTCATCATGTTGTTGGTAGGACTGAAAAGGAATGTGTTGCTCGTTTTCTTAAGCTTCCTTTTGGTGATCAATTCCTGCATTATCAACAGTCTGAGTCTGCTTCTCTCACTGATGAAGGTTCTCATCAGTTGAAGCCTCCTGCTGATGCTGAATGTGAATCGGAAACTGTTGACTCGGATAAATCTAGTAAGAAAATGCGGCTCACACCTCTTGCGGATGCAAGCAATCCTATCATGGCTCAGGCTGCTTTCCTTTCTGCTTTGGCAGGGACTGAGGTTACACATGCTGCGGCTCAAGCTGCTCTAACAACTCTGACCGATGTTTACAAGTCAACTAGAACTAACTATCGACCATTTCAAAAGAATGCATTGCAACAAGATGCTGGTGTTGCATCCAACGGTAGTAATGCTTCAGATTCTATTCAAGGATCTCTATTGCGTGCAAATTTACAGCGCGAGAAGGAAGAATCAGATGCGGAAAAAGCAATTTCTGAGATTATAGAAGTTCAGATGAAAACTATCCAGGACAAGCTTATCAAGTTTGAAGATTTAGACCTGCTAATGGAAAAAGAATCCCAACAATTGGAGCAAGTGAAGAGTTTGTTTTTCCTTGATCAGCTTAACCTTTTATTTCGTAAAACATCCGCACCAACGACTGCAGAAGGCAATCATGTAAAGAGGAATTGA 1479 0.4348 MATSTPDRPAEPPSSASEPPQPQPQVQTQPPISTPPPAKPPLTPPPPKPGVPLPDPKSSSDVSLILIPSHSRWFSWDSIHECEIRNIPDSSKNPRVYKYYRNSIVKHFRFNPNRKITFTDVRKTLVGDVGSIRRVFDFLEAWGLINYHPSSSLSKPFKWEDKDTKPESGSNFTDSPSPAPVKETAKRICSGCKTNCVVACFACDKNDMTLCARCFVRGNYRIGMSNTEFKRVEISEETKTEWTEKETLNLLEAITNFGDDWKRVSHHVVGRTEKECVARFLKLPFGDQFLHYQQSESASLTDEGSHQLKPPADAECESETVDSDKSSKKMRLTPLADASNPIMAQAAFLSALAGTEVTHAAAQAALTTLTDVYKSTRTNYRPFQKNALQQDAGVASNGSNASDSIQGSLLRANLQREKEESDAEKAISEIIEVQMKTIQDKLIKFEDLDLLMEKESQQLEQVKSLFFLDQLNLLFRKTSAPTTAEGNHVKRN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00145 492 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3B 1 486 - -
Tsu07g00145 492 MobiDBLite consensus disorder prediction 158 180 - -
Tsu07g00145 492 ProSiteProfiles SANT domain profile. 237 288 IPR017884 -
Tsu07g00145 492 PANTHER SWI/SNF COMPLEX-RELATED 1 486 - -
Tsu07g00145 492 ProSiteProfiles SWIRM domain profile. 65 156 IPR007526 GO:0005515
Tsu07g00145 492 CDD SANT 241 283 IPR001005 -
Tsu07g00145 492 Pfam SWIRM-associated region 1 411 474 IPR032451 -
Tsu07g00145 492 SMART sant 238 286 IPR001005 -
Tsu07g00145 492 MobiDBLite consensus disorder prediction 12 54 - -
Tsu07g00145 492 Pfam SWIRM domain 68 147 IPR007526 GO:0005515
Tsu07g00145 492 Coils Coil 409 429 - -
Tsu07g00145 492 Pfam Myb-like DNA-binding domain 240 283 IPR001005 -
Tsu07g00145 492 MobiDBLite consensus disorder prediction 300 329 - -
Tsu07g00145 492 SUPERFAMILY Homeodomain-like 63 156 IPR009057 -
Tsu07g00145 492 Gene3D - 237 287 - -
Tsu07g00145 492 ProSiteProfiles Myb-like domain profile. 234 284 IPR001005 -
Tsu07g00145 492 Gene3D - 71 151 IPR036388 -
Tsu07g00145 492 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 239 276 IPR017930 -
Tsu07g00145 492 MobiDBLite consensus disorder prediction 308 329 - -
Tsu07g00145 492 MobiDBLite consensus disorder prediction 1 61 - -
Tsu07g00145 492 SUPERFAMILY Homeodomain-like 238 289 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00145 Tsu-Chr7 1105995 1108582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00145 197 280 EF-hand Containing Proteins AT3G07740 28.704 5.15e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00145 K11649 - gmx:100779777 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00145 07 1105995 1108582 Tsu07g00145 07 1105995 1108582 ECH