Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00141 ATGGCAGAGGGTAAAACAGCTTCTCAGAAGTCTCTTGAGGATTTCGATCCCCAAATGAAACCTCAATCCAACAAGTTTGCTTTTGCTTGCGCTATTTTGGCTTCCATGACTTCCATTTTACTTGGTTATGATATTGGGGTGATGAGTGGAGCAGTGATATACATTAAAAGGGACCTGAAACTATCTGATGTACAAATCGAAATCTTGGTAGGCATCATTAACCTTTTCTCCTTAATAGGCTCCTGCCTCGCTGGTAGAACCTCTGATTGGATCGGTCGCCGTTACACCATTGTTCTTGCTGGTGCCATCTTCTTTGTCGGTGCAATCCTCATGGGGTTCTCTCCCAACTTTCcctttctcatgtttgctcgCTTCATTGCCGGTATTGGCATCGGTTACGCCCTTATGATTGCCCCTGTTTACACCGCGGAAGTATCTCCTGCTTCCTCTCGCGGCTTCCTCACCTCCTTCCCCGAGGTATTCATCAATGGAGGGATATTACTTGGATACATTTCAAACTTTGGATTTTCGAAGCTTCCACTTGAAGTAGGATGGAGAGTGATGCTCGGAATCGGAGCAATTCCTTCTGTAATCTTAGCCGTTGGAGTGTTAGCAATGCCTGAGTCACCTCGTTGGCTCGTTATGAAAGGAAGACTCGGTGATGCTACAAAAGTTCTCAACAAGACCTCTGATTCTGAACAAGAGGCTCAACTTAGGCTCATGGAAATCAAAGCTGCAGCTGGAATTCCGGAAAATTGCAACGACGACGTCGTTTCAATAAACAGAACAAACGAGAGGGAAGGTACTACTGTGTGGAAAGAGTTGTTTCTTTATCCTACACTAGCAGTGCGTCATATAGTGATTGCTGCTCTAGGGATTCATTTCTTTCAACAAGCTTCGGGTATAGACGCTGTCGTTTTGTATAGTCCTACTATTTTTCGTAAAGCTGGACTTGAATCTGATACGGAACAGTTACTTGCAACTGTGGCTGTTGGATTGGTTAAAACCGTTTTTATTTTAGTGGCTACTTTTTTGTTGGATCGGGTCGGGCGTAGACCGTTGTTGTTGTCTAGTGTTGGTGGAATGGTGATTTCCTTACTCACTCTTGCGGTGAGTCTCACAGTCGTTGATCATTCGCACGTGAGACAGATGTGGGCCGTTGGATTGAGCATTGCTACTGTTTTGTCCTACGTGGCAACGTTTTCAATTGGTGCGGGTCCTATTACTTGGGTTTATAGTTCTGAGATTTTTCCGTTGCGGTTACGCGCTCAAGGTGCGTCTGCAGGTGTGGTGGTGAATAGGGTGACTAGTGGAATAATTTCAATGACATTTCTGTCCTTATCTGATAAGATAAGTATTGGAGGGGCTTTCTTTCTATTTGGTGGAATTGCAGCTTGTGGATGGATCTTCTTCTATACAATGCTCCCTGAAACACAAGGTAAGACTCTTGAAGAAATGGAAGGGTCTTTTGGTAAATTTTGGAGGAAGTCAAATACCAAGGGTACTAATAATGATAATGGAGAGATCCAATTCGCCAATTAG 1542 0.4351 MAEGKTASQKSLEDFDPQMKPQSNKFAFACAILASMTSILLGYDIGVMSGAVIYIKRDLKLSDVQIEILVGIINLFSLIGSCLAGRTSDWIGRRYTIVLAGAIFFVGAILMGFSPNFPFLMFARFIAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNFGFSKLPLEVGWRVMLGIGAIPSVILAVGVLAMPESPRWLVMKGRLGDATKVLNKTSDSEQEAQLRLMEIKAAAGIPENCNDDVVSINRTNEREGTTVWKELFLYPTLAVRHIVIAALGIHFFQQASGIDAVVLYSPTIFRKAGLESDTEQLLATVAVGLVKTVFILVATFLLDRVGRRPLLLSSVGGMVISLLTLAVSLTVVDHSHVRQMWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGASAGVVVNRVTSGIISMTFLSLSDKISIGGAFFLFGGIAACGWIFFYTMLPETQGKTLEEMEGSFGKFWRKSNTKGTNNDNGEIQFAN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00141 513 CDD MFS_PLT 33 486 IPR044776 GO:0005351
Tsu07g00141 513 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 508 IPR045262 GO:0015144
Tsu07g00141 513 Pfam Sugar (and other) transporter 30 488 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu07g00141 513 PANTHER SUGAR TRANSPORTER 14 508 - -
Tsu07g00141 513 Gene3D MFS general substrate transporter like domains 20 492 IPR036259 -
Tsu07g00141 513 ProSitePatterns Sugar transport proteins signature 2. 126 151 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu07g00141 513 ProSitePatterns Sugar transport proteins signature 1. 84 101 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu07g00141 513 PRINTS Sugar transporter signature 121 140 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu07g00141 513 PRINTS Sugar transporter signature 297 307 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu07g00141 513 PRINTS Sugar transporter signature 391 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu07g00141 513 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu07g00141 513 PRINTS Sugar transporter signature 414 426 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu07g00141 513 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 479 IPR020846 GO:0022857
Tsu07g00141 513 SUPERFAMILY MFS general substrate transporter 16 487 IPR036259 -
Tsu07g00141 513 TIGRFAM SP: MFS transporter, sugar porter (SP) family 14 486 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00141 Tsu-Chr7 1073505 1076347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00141 13 509 Organic Solute Cotransporters AT3G18830 72.490 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00141 - - gmx:102670364 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00141 07 1073505 1076347 Tsu07g00141 07 1073505 1076347 ECH