LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu07g00028	ATGGAGTTGGCACAACTTGAAGCATTGTGCGAGAGGCTTTACAATTCACAAGACTCAGTTGAAAGGGCTCATGCCGAGAACACACTTAAATGCTTCTCTATGAACACTGAATACATTTCCCAATGCCAATACATTCTTGATCATGCTTTGACACCTTATGCATTGATGCTTGCTAGTTCTAGTTTGTTGAAGCAAGTCACCGAACATAGCCTTGCTCTCAAGCTCCGTCTAGATATATGGACTTACCTCATCAACTATCTAGCCACCAGAGGACCTGAGTTACAACCTTTTGTCACTGCTTCTCTGATCCAACTTTTGTGTCGAGTCACCAAATTTGGATGGTTTGATGATGACAGATTCCGGGAATTGGTCAAAGAATCAATGAACTTTTTGAGTCAGGCAACGCCAGGTCATTATGCCATTGGTTTGAAGATATTAAATCAGCTTATTTCTGAGATGAATCAGGCTAATGCTGGTTTACCTGCAACAAAGCATCGAAGGGTAGCTTGTTCCTTCAGGGACCAATCtctttttcaaatatttcagATATCTTTAACATCATTGGGTCAGCTGAAGAATGACGCCATCAGTCAATTGCAAGAATTGGCACTTTCTCTTTCTTTGAAATGTTTATCATTTGATTTTGTGGGGACATCTGTGGATGAAAGTTCAGATGAGTTTGGCACAGTTCAGATTCCATCTCCCTGGAAATCAGTTTTGGAGGATTCTACAACGTTACAACTATTTTTTGATTACTATGCCATTACAAAGCCCCCTCTTTCGAAGGAGGCACTGGAGTGCTTGGTGCGACTAGCGTCTGTAAGACGTTCTGTGTTTACAAATGATGCTGCTCGTTCTAAGTTTTTGGCCCATTTAATGACAGGAACCAAAGTAATCCTGCAAACAGGGCAAGGTCTTGCAGATCATGATAATTACCATGAGTTCTGTCGTCTTCTTGGTCGGTTCAGAGTCAATTACCAGTTGTCAGAGCTTGTTAATGTGGAAGGCTATAGCGATTGGATACGTTTGGTTGCAGAGTTCACTCTTAAATCTTTGCAGTCATGGCAGTGGGCCAGCAACAGTGTCTACTACCTGTTAGGGTTGTGGTCCAGATTGGTGTCTTCTGTTCCATATTTGAAGGGTGACGCACCAAGCTTACTGGATGAGTATGTTCCTAAGATTACTGAAAGTTTCATCACATCAAGATTCAATTCTGTGCAGGCTGGATTACCTGATGATCTTGAGAACCCCTTAGACAATGCTGAACTTCTTCAAGATCAATTAGACTGCTTTCCATATTTATGCAGATTTCAGTATGAAAGCAGtagtttatttataataaacatAACAGAGCCTGTCCTGCAAATATACACGGAAAGAGCAAGATTACAGGTTAGTGATAGCAATGATCTCTCTGTGATTGAAGATAAACTTGCTTGGATTGTTCACATCGTTGCAGCAATTCTTAAGATAAAACAATGCACGGGTTGTAGTGCGGAATCTCAGGAAGTGCTAGATGCTGAAATTTCAGCTCGAGTCCTGCAGTTAATCAATGTAACTGACAGTGGAGTACACAGTCAGAGATACGGTGAAATAAGCAAACAACGACTTGATAGGGCAATACTTACTTTTTTTCAGCATTTCCGAAAGTCTTATGTAGGAGATCAGGCAATTCATTCTTCCAAGCAGTTATATGCCCGGTTATCGGAGCTTCTTGGCCTGCATGATCATCTATTACTGTTGAATGTTATTGTTGGCAAGATAGCAACCAACCTAAAGTGCTACACTGAGAGTGAAGAGGTCATTGATCACACCTTAAGTTTGTTCTTGGAGCTTGCATCAGGCTACATGACTGGGAAGCTACTTCTGAAGTTGGATACAGTGAAATTTATCGTTGCCAATCATACGAGGGAACATTTTCCATTTTTGGAAGCAAAGAAGTGCTCCCGCAGCAGAACGACTTTCTATTACACTATTGGCTGGTTGATATTCATGGAGGATAGTCTTGTGAAATTTAAATCTTCAATGGATCCACTCCAGCAGGTTTTCCTCAGTTTGGAATCAACTCCCGATTCAGTTTTTCGAACAGATGCTGTAAAGTGTGCACTTGTTGGTTTGATGAGGGACCTTAGAGGAATCACAATGGCCACAAATAGCCGCCGAACTTATGGCTTTCTATTTGACTGGTTGTATCCTGCACACATGCCTATACTCTTAAAAGGAATCTCACACTGGACAGACAACCCAGAGGTTACGACCCCATTGTTGAAGTTCATGGCTGAGTTTGTGCTAAATAAAGCTCAGCGTTTGACATTTGACTCTTCTTCTCCAAATGGAATACTTCTCTTCAGGGAAGTTAGTAAACTGATTGTCGCTTATGGATCTAGAATTTTGACTCTTCCAAATACTGCTGATGTATATACGTACAAGTACAAAGGAATTTGGATTTGCTTAACAATACTATCAAGAGCCCTTGCAGGAAACTATGTCAACTTTGGCGTGTTTGAGTTGTATGGTGACAGAGCTCTATCTGATGCACTTGATGCTGCTCTGAAAATGACACTGTCAATTCCCATGTCTGATATATTGGCTTATCGAAAGCTAACAAGGGCGTATTTTGCATTCTTGGAAGTTTTGTTCAACAGCCATATCACTTTCATATTGAGCTTGGACACAAACACCTTTATGCATATAGTTGGCTCCCTCGAATCTGGTCTAAAAGGCTTGGATACAAATATATCATCACAGTGTGCATCTGCTGTTGATAATTTGGCTGCTTTCTATTTTAACAACATCACTATGGGAGAGGGTCCTAATTTACCTGCAGCTGTTAATCTTGCTCGTCATATTGCAGAGTGTCCCACTCTGTTCCCAGaaATTTTGAAGACTCTGTTTGAGATCTTATTGTTTGAAGATTGTGGCAACCAATGGAGTTTGAGCAGGCCAATGTTGAGCTTGATACTCATAAATGAGAAGACATTCTCTGATTTGAAAGCTCAAATCTTGTCATCGCAGCCAATGGATCACCATCAACGGCTCTCTCTATGTTTTGATAAACTTATGGCTGATGTTACTCTAAGCCTAGACTCAAAAAACAGGGATAAGTTTACTCAAAACCTCACCATATTTCGGCATGATTTCCGTGCCAAATAA	3153	0.4053	MELAQLEALCERLYNSQDSVERAHAENTLKCFSMNTEYISQCQYILDHALTPYALMLASSSLLKQVTEHSLALKLRLDIWTYLINYLATRGPELQPFVTASLIQLLCRVTKFGWFDDDRFRELVKESMNFLSQATPGHYAIGLKILNQLISEMNQANAGLPATKHRRVACSFRDQSLFQIFQISLTSLGQLKNDAISQLQELALSLSLKCLSFDFVGTSVDESSDEFGTVQIPSPWKSVLEDSTTLQLFFDYYAITKPPLSKEALECLVRLASVRRSVFTNDAARSKFLAHLMTGTKVILQTGQGLADHDNYHEFCRLLGRFRVNYQLSELVNVEGYSDWIRLVAEFTLKSLQSWQWASNSVYYLLGLWSRLVSSVPYLKGDAPSLLDEYVPKITESFITSRFNSVQAGLPDDLENPLDNAELLQDQLDCFPYLCRFQYESSSLFIINITEPVLQIYTERARLQVSDSNDLSVIEDKLAWIVHIVAAILKIKQCTGCSAESQEVLDAEISARVLQLINVTDSGVHSQRYGEISKQRLDRAILTFFQHFRKSYVGDQAIHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESEEVIDHTLSLFLELASGYMTGKLLLKLDTVKFIVANHTREHFPFLEAKKCSRSRTTFYYTIGWLIFMEDSLVKFKSSMDPLQQVFLSLESTPDSVFRTDAVKCALVGLMRDLRGITMATNSRRTYGFLFDWLYPAHMPILLKGISHWTDNPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRILTLPNTADVYTYKYKGIWICLTILSRALAGNYVNFGVFELYGDRALSDALDAALKMTLSIPMSDILAYRKLTRAYFAFLEVLFNSHITFILSLDTNTFMHIVGSLESGLKGLDTNISSQCASAVDNLAAFYFNNITMGEGPNLPAAVNLARHIAECPTLFPEILKTLFEILLFEDCGNQWSLSRPMLSLILINEKTFSDLKAQILSSQPMDHHQRLSLCFDKLMADVTLSLDSKNRDKFTQNLTIFRHDFRAK	1050

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu07g00028	1050	Gene3D	-	831	1049	IPR011989	-
	Tsu07g00028	1050	PANTHER	EXPORTIN 4,7-RELATED	3	1050	IPR044189	GO:0005049\|GO:0051169
	Tsu07g00028	1050	PANTHER	BNAA10G30440D PROTEIN	3	1050	-	-
	Tsu07g00028	1050	SUPERFAMILY	ARM repeat	1	972	IPR016024	-
	Tsu07g00028	1050	Coils	Coil	3	23	-	-
	Tsu07g00028	1050	Gene3D	-	1	557	IPR011989	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu07g00028	Tsu-Chr7	267284	286988	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu07g00028	K18460		-	gmx:100804346	1947.55