Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00027 ATGTCTGCTGCTTCGAGTATCGCAGGAACAGGGCTCACCCTCCTCAACtgcttctcttcttcttctcgaTGTCGAACTCGTTCTCGTTCTGTAACAATGGCCGTATCTACCGACCCGAGACCCAAGACCGACAAACTCATTCTCCGCAAATCCGAAGAAGCTTTCGCCGCTGCCAAGGAATTGATGCCTGGAGGTGTTAACTCTCCCGTTCGTGCCTTCAAATCAGTTGGTGGACAACCCATTATCATTGATTCCGTCAAAGGATGTCGTATGTGGGACATTGACGGCAACGAATACATTGACTACGTTGGTTCTTGGGGTCCTGCAATTATTGGTCACGCTGATGATCAGGTGCTTGCTGCTCTGGGTGAAACAATGAAGAAAGGAACCAGCTTTGGTGCACCTTGTCTTCTGGAAAATACTCTAGCTGAGATGGTTATTGCTGCAGTTCCCAGCATTGAAATGGTTAGGTTTGTTAATTCCGGCACTGAAGCATGTATGGGAGCACTCCGTCTGGCACGTGCTTATACTGGCAAGGAGAAGATCATCAAGTTTGAGGGCTGTTATCACGGCCACGCTGATCCTTTTCTTGTTAAGGCAGGCAGTGGAGTTGCCACTCTAGGACTTCCTGATTCCCCTGGTGTTCCTAAAGCTGCCACCAATGAAACCCTTACGGCCCCCTTCAATGACTTTGCTGCTGTTGAGAAAATCTTTGAGGCTAACAAAGGAGAGATAGCCGTAGTTTTCCTCGAACCTGTTGTTGGAAATTCTGGTTTCATTACACCTAAACCTGATTTCCTTAGTTCCTTGCGCAAAATCACCAAGGAGAACAATGCCCTTCTCGTGTTTGATGAAGTGATGACTGGATTTCGTTTGTCTTATGGAGGTGCTCAAGAATATTTTGGCATAACTCCTGATATAACAACTCTGGGGAAGATCATTGGAGGGGGTTTGCCAGTAGGTGCATATGGAGGGAGGAGGGATATTATGGAGACGGTGGCTCCGGCTGGACCTATGTACCAGGCTGGGACCTTGAGTGGGAACCCTTTGGCAATGACTGCGGGCATACACACTCTGAAGCGTATTAAGGAGCCAGGAACTTACGAATACTTGGACAACATTACAGGTGAGCTTGTTCAAGGCATTGTTGAAGCTGGTAAGAGGGCAGGGCATGCAATATGTGGTGGGCATATAAATGGGATGTTTGGGTTTTTCTTTACAGAAGGACCCGTTTACAATTTTACAGATGCAAAAAAGAGTGACACTGCAAAGTTTGCTAAGTTCTTCTGGGGTATGTTAGCAGAAGGTGTCTATTTGGCACCTTCACAGTTTGAGGCTGGGTTCACAAGCTTGGCACATACTTCAGATGACATAAAAAAGACTATTGCTGCTGCTGAGAAGGTCTTTAGGGAGATCTGA 1419 0.463 MSAASSIAGTGLTLLNCFSSSSRCRTRSRSVTMAVSTDPRPKTDKLILRKSEEAFAAAKELMPGGVNSPVRAFKSVGGQPIIIDSVKGCRMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENTLAEMVIAAVPSIEMVRFVNSGTEACMGALRLARAYTGKEKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATNETLTAPFNDFAAVEKIFEANKGEIAVVFLEPVVGNSGFITPKPDFLSSLRKITKENNALLVFDEVMTGFRLSYGGAQEYFGITPDITTLGKIIGGGLPVGAYGGRRDIMETVAPAGPMYQAGTLSGNPLAMTAGIHTLKRIKEPGTYEYLDNITGELVQGIVEAGKRAGHAICGGHINGMFGFFFTEGPVYNFTDAKKSDTAKFAKFFWGMLAEGVYLAPSQFEAGFTSLAHTSDDIKKTIAAAEKVFREI 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00027 472 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 281 317 IPR005814 GO:0008483|GO:0030170
Tsu07g00027 472 CDD OAT_like 55 469 IPR005814 GO:0008483|GO:0030170
Tsu07g00027 472 SUPERFAMILY PLP-dependent transferases 50 471 IPR015424 -
Tsu07g00027 472 TIGRFAM hemL: glutamate-1-semialdehyde-2,1-aminomutase 50 471 IPR004639 GO:0033014|GO:0042286
Tsu07g00027 472 Pfam Aminotransferase class-III 80 389 IPR005814 GO:0008483|GO:0030170
Tsu07g00027 472 Gene3D Aspartate Aminotransferase, domain 1 53 465 IPR015422 GO:0003824
Tsu07g00027 472 PANTHER BNAA09G06670D PROTEIN 18 470 - -
Tsu07g00027 472 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 18 470 - -
Tsu07g00027 472 Hamap Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 50 472 IPR004639 GO:0033014|GO:0042286
Tsu07g00027 472 Gene3D - 116 364 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00027 Tsu-Chr7 264052 266058 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00027 K01845 - gmx:547795 823.542