Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00019 ATGGCATTCTCTTCCGTTTCTTCATTCTCATTATCAATACCCTCTTCACGTTCAAATTCACTTTCATTCTCAACTTCAATTTCTAAGAACCCGTCTTCTTCTCCTCAATTTCTGAAATtgccacaacaacaacaacaacatgatggaagaacaagaacaaaaagAAGAGGGATGGTGGTGATGATGAGCGTGGAAGCAGGTGTTGGAGTCATGGCTACCAAATTAGGAATGATGAGCTTTTTCCAACCGAACGGAGAGGTTGTTCCAGTCACCGTTGTCGGTTTCAAAGAAGGCAACATCGTCACTCAGATCAAAACAGATGCAACCGACGGTTACAACGCCGTCCAAGTTGGTTACCGTAGGGTTAGGGACCGCAAATTAACGAAACCCGAAATGGGTCATCTTGAAAAGGCGGGAGCCATTCCCATGCGCCATCTTCAGGAGTTTCGTCTTCAAAGCGTTGATGGTTTTGAAGTTAATCAGCGccttgtatttgatgaacttttCAACGAGGGTGATCTTGTTGATGTCTCCGGCACCACCATCGGCAAGGGTTTCCAAGGTGGTATCAAGCGTTATAACTTCAAGAGGGGTCCAATGAGCCATGGTTCCAAGAGTCATAGACAACTGGGATCTATTGGTGCCGGAACTACGCCTGGACGTGTATACAAGGGAAAGAAGATGCCTGGTAGGATGGGTGGAACCAACAGGAAGACCAGAAAGCTTAAGATTGTTAAAATTGATAAAGATCTTAATGTTATTATGATCAAAGGTGCTCTTCCTGGCAAGCCTGGGAATCTTCTGCGGATAGCTCCCGCTAAGATTGTTGGCAAGAACATTCCTAAGAATTAG 852 0.419 MAFSSVSSFSLSIPSSRSNSLSFSTSISKNPSSSPQFLKLPQQQQQHDGRTRTKRRGMVVMMSVEAGVGVMATKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKLTKPEMGHLEKAGAIPMRHLQEFRLQSVDGFEVNQRLVFDELFNEGDLVDVSGTTIGKGFQGGIKRYNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVKIDKDLNVIMIKGALPGKPGNLLRIAPAKIVGKNIPKN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00019 283 Gene3D - 100 160 - -
Tsu07g00019 283 SUPERFAMILY Translation proteins 67 279 IPR009000 -
Tsu07g00019 283 TIGRFAM L3_bact: 50S ribosomal protein uL3 69 270 IPR019927 GO:0003735|GO:0005840|GO:0006412
Tsu07g00019 283 PANTHER 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 62 282 - -
Tsu07g00019 283 MobiDBLite consensus disorder prediction 197 235 - -
Tsu07g00019 283 MobiDBLite consensus disorder prediction 1 47 - -
Tsu07g00019 283 Hamap 50S ribosomal protein L3 [rplC]. 67 274 IPR019927 GO:0003735|GO:0005840|GO:0006412
Tsu07g00019 283 Pfam Ribosomal protein L3 161 249 IPR000597 GO:0003735|GO:0005840|GO:0006412
Tsu07g00019 283 ProSitePatterns Ribosomal protein L3 signature. 169 192 IPR019926 -
Tsu07g00019 283 PANTHER 50S RIBOSOMAL PROTEIN L3 62 282 IPR019927 GO:0003735|GO:0005840|GO:0006412
Tsu07g00019 283 MobiDBLite consensus disorder prediction 1 55 - -
Tsu07g00019 283 Gene3D Translation factors 195 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00019 Tsu-Chr7 215226 216846 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00019 K02906 - csv:101212113 416.387