Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00018 ATGGGAAGAGAAGCGTGCGTATGTGCTGTTTATGCAATGAGAGAAGAGCTTCTCTTAGCAGACCTAAAACCCTTCAACAGATTTGCAGAGAATGTTTCTATCTTGCTTTCGAACATGAGATTCATCAAATCATCGTCTCCAACCGCCTCTTCACCCGCGGCGACCTTGTTGCTATTGGCGCTTCCGGCGGTAAAGACTCCACCGTCCTCGCCTATGTTTTATCTAAACTCAATCAAATCCACGATTACGGCCTCCATCTCTTTTCTCCTCTCCGTCGACGAGGGCATCACCGGCTACCGCGACGATTCTCTCCAAACAGTTCACAGAAATCAGATTCAGTACGGATTACCTCTCAAAGTTGTATCCTACAAGGATTTGTACGGATGGACCATGGACGAGATCGTCAAACTGATCGGTCTGAAGAACAATTGCACCTTCTGCGGCGTGTTCCGTCGCCAGGCACTGGATCGAGGAGCCGCATTCCTGAAAGCAGATAAACTGGTGACAGGACACAACGCTGACGACATAGCTGAGACAGTTCTGTTGAACATATTGAGAGGAGATATAGCTAGATTGAGTAGATGCAGTTCAATAATAACAGGTGAAGATGGACCAATCCCTAGATGCAAACCTTTCAAGTATACTTACGAAAAGGAGATTGTTATGTATGCATATTTCAAGAAGCTTGATTACTTTTCCACTGAATGCATTTATTCTCCAAATGCATATCGTGGTTTTGCCCGCGAGTTCATCAAGGATTTGGAGAGAATCAGACCCAGAGCCATTCTTGACATCATCAAATCGGGGGAGAATTTCAGGATTTCTACAACTACTAAAATGCCAGAGCAGGGAACTTGTGAACGCTGTGGTTATATTTCTAGTCAGAAATGGTGTAAAGCTTGTGTTCTGCTTGATGGACTGAATCGAGGTTTGCCTAAACTGGGAATTGGACGGAGTCGGGTTGCTATTGGTTGCAAGGAAGAAAATGAAAGCCATGGAAGAAAGAACATTGAGAGCAAACAGTGTGGATCTTTAGACTTCTGA 1044 0.4473 MGREACVCAVYAMREELLLADLKPFNRFAENVSILLSNMRFIKSSSPTASSPAATLLLLALPAVKTPPSSPMFYLNSIKSTITASISFLLSVDEGITGYRDDSLQTVHRNQIQYGLPLKVVSYKDLYGWTMDEIVKLIGLKNNCTFCGVFRRQALDRGAAFLKADKLVTGHNADDIAETVLLNILRGDIARLSRCSSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGENFRISTTTKMPEQGTCERCGYISSQKWCKACVLLDGLNRGLPKLGIGRSRVAIGCKEENESHGRKNIESKQCGSLDF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00018 347 Pfam PP-loop family 150 244 IPR011063 -
Tsu07g00018 347 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 1 88 335 IPR000541 GO:0000049|GO:0002098|GO:0034227
Tsu07g00018 347 TIGRFAM TIGR00269: TIGR00269 family protein 206 305 IPR000541 GO:0000049|GO:0002098|GO:0034227
Tsu07g00018 347 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 89 273 - -
Tsu07g00018 347 PANTHER ATPASES OF THE PP SUPERFAMILY-RELATED 88 335 - -
Tsu07g00018 347 Pfam Zinc-ribbon 284 314 IPR032442 -
Tsu07g00018 347 Gene3D HUPs 49 331 IPR014729 -
Tsu07g00018 347 CDD Alpha_ANH_like_II 88 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00018 Tsu-Chr7 210763 213228 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00018 K14168 - gmx:100816096 484.952