Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00006 atgatctatgtatttttcAGATACCAAAGGTCCATTTCTTCAAGATTTCCTTTATTTGTATCTCagGATGGATCAAATTCAGACGTCAAAAGTAAAGCTTTGAGCCATGATGAACTATCATATATGCAGCACTTAGATTTTGAGTCGGTTCAAACTGAAAGGCCAGGAGAGTTAATTGCTTACTACAAGATTGCACGTCATTACAAGTGGGCTCTAGGCCAACTGTTCGACAAGCATAACTTCAGTCGAGTCATCATTCTTGAAGATGACATGGAAATAGCACCTGATTTCTTTGATTACTTTGAAGCTATGGCAACTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCGTCATGGAATGACAATGGCCAGAGGCAGTTTGTACATGATCCATACGAACTTTATCGCTCGGACTTCTTTCCTGGACTAGGATGGATGCTGACTAGATCTACATGGGATGAACTATCACCAAAGTGGCCAAAGGCCTACTGGGATGATTGGTTGAGATTAAAAGAGAATCACAAAGGACGCCAGTTTATCCGACCAGAAGTATGCAGAACATATAATTTTGGAGAACATGGTTCTAGTTTGGGACAGTTTTTTAAGCAGTATCTTGAGCCAATCAAGCTGAATGATGTCCAGGTCGACTGGAAGTCAATGGACTTGAGCTATTTGTTGGAGGACAAATATGCTATACACTTCGCCAACAATATTAAAAAAGCCAAACCTGTCTCTGGAGCAGACATCGTTCAAAAGGCACAAAATATAGACGGTGATGTGCGTATAAAGTATACAGATCAGTGGGACTTTGAAAACATTGCTCAACAATTTGGTATATTTCAAGAGTGGAAGGATGGTGTGCCTAGGGCAGCTTATAAAGGAGTAGTCGTTTTCAGATATCAAACCACAAGGCGTATATTCCTTGTTGGTCCAGAATCTTTGAAGCTACTTCAGATCGAAGATTTGGATTCTTAA 978 0.3957 MIYVFFRYQRSISSRFPLFVSQDGSNSDVKSKALSHDELSYMQHLDFESVQTERPGELIAYYKIARHYKWALGQLFDKHNFSRVIILEDDMEIAPDFFDYFEAMATLLDKDKSIMAVSSWNDNGQRQFVHDPYELYRSDFFPGLGWMLTRSTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFKQYLEPIKLNDVQVDWKSMDLSYLLEDKYAIHFANNIKKAKPVSGADIVQKAQNIDGDVRIKYTDQWDFENIAQQFGIFQEWKDGVPRAAYKGVVVFRYQTTRRIFLVGPESLKLLQIEDLDS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00006 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 6 206 IPR029044 -
Tsu07g00006 325 Pfam GNT-I family 6 320 IPR004139 GO:0006486|GO:0008375
Tsu07g00006 325 PANTHER ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE-RELATED 3 321 - -
Tsu07g00006 325 PANTHER PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 321 - -
Tsu07g00006 325 Gene3D - 243 320 - -
Tsu07g00006 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 14 320 IPR029044 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00006 8 322 Glycosyltransferase AT4G38240 73.333 1.47e-176 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00006 K00726 - gmx:100795005 595.89