Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03684 ATGGCGAAGATGAAAATGAGAGAAACATCAAAATCCGATTACGAAGCTGTCAGAATCGCTCGCATATCAGAGAACAAGGCTAGGTTAGAATCATTGGGTATTTTGAATAAAGTTTCGAAGCTTCGAGAAGCATCTACTCCGACTAAAAAACAACGTACAAATGTGAAAACGGTTTACGGTCTTACTCCCCTGCGCCGATCTCAGCGAATCAAGGATTTCACCGCCGGAACCATTACTCCGGTCGCCACAGCTACCTCCGATGACCTTCAGTCGCGACGATCTCACCGTTTTAAAAGTAGTTTCAGCAACGATGTTGTTACGCCAAAAAAAgAGAAGTTAAATATAGAGGAAGgggaagaagagaaagagagacaCATTGTAACTACAAATAAATGGGAAGAGAAGAGGCCTGCCAATGCACCTCTTATTGAACTGAATCCAAAAGATGTAGAACATTTTCTTTGGGCAGAGACTTCTGGCAGGCGCTGCGATAGCAAGGGTAGAGGAAGTATTTATAATCCAGTTTTGGGGATATGCTGCCACTTTTGCAGGCAAAAGAAATTGTGTGGGGAAGAAGATTGCAAAAGATGTGGGAATTGTGATGTGGATGAACCTTGTCTAGGAAAGACTGATTGTTCAGTGTGTCACTCGAGCAATGGTGTCTTTTGTCGAGCCTGTCTTAAGGTTCGGTACGGTGAAGAAATTGAGGAGGTGAGACAGAACAAGGAATGGATGTGTCCACATTGCATAGAAGATAAAGGAATAAACCCTTACTGGATATGTAACAGCTCAATATGCCTGAGGAAACGAAAGATGTCACCAACAGGGATTGCAATACACAAAGGCAATGAAATACCGGAGGAGTACTCATATCAACAAAAGAAGAAGTTTTTCCGAGATGCTAACTTCTATTTTTGGGATGACCCATATCTCTTCAAGGTAGGACAAAATGGTCTGATTCGTCGATGTGTTGATGACGACGAGGCGCAAAGTATAATGTGGCATTGCCATAGTTCGCCTTATGGAGGACACCACAGTGGACAGAGGACTGCAACAATGGTACTTCAGAGCGGCTTCTTTTGGCCTACATTGTTTAAAGATTGCGTCGAGTTCGTCCAACGATGCGATAATTGCCAAAAGACAGGGAATGTATCGAAGAGAGACGAGATGCTCCTGAATAGTATGCTCGAAGTGGAGCCATTTGATTGTTGGGGGATTGACTTCATGGGACCGTTCCCGTCCTCAAAGTCAAATCTCCACATTCTAGTATGTGTTGACTATGTGACAAAGTGGGTTGAAGCTATCGCTTGTCAAGCTAATGATGCCCACACAGTGGTAAATTTTTAA 1347 0.4254 MAKMKMRETSKSDYEAVRIARISENKARLESLGILNKVSKLREASTPTKKQRTNVKTVYGLTPLRRSQRIKDFTAGTITPVATATSDDLQSRRSHRFKSSFSNDVVTPKKEKLNIEEGEEEKERHIVTTNKWEEKRPANAPLIELNPKDVEHFLWAETSGRRCDSKGRGSIYNPVLGICCHFCRQKKLCGEEDCKRCGNCDVDEPCLGKTDCSVCHSSNGVFCRACLKVRYGEEIEEVRQNKEWMCPHCIEDKGINPYWICNSSICLRKRKMSPTGIAIHKGNEIPEEYSYQQKKKFFRDANFYFWDDPYLFKVGQNGLIRRCVDDDEAQSIMWHCHSSPYGGHHSGQRTATMVLQSGFFWPTLFKDCVEFVQRCDNCQKTGNVSKRDEMLLNSMLEVEPFDCWGIDFMGPFPSSKSNLHILVCVDYVTKWVEAIACQANDAHTVVNF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03684 448 PANTHER OS05G0300700 PROTEIN 8 284 IPR040221 GO:0006355
Tsu06g03684 448 PANTHER EXPRESSED PROTEIN 8 284 - -
Tsu06g03684 448 Gene3D - 288 381 - -
Tsu06g03684 448 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 173 282 IPR018866 -
Tsu06g03684 448 Pfam Integrase zinc binding domain 324 381 IPR041588 -
Tsu06g03684 448 Gene3D - 395 448 IPR036397 GO:0003676
Tsu06g03684 448 SUPERFAMILY Ribonuclease H-like 399 447 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03684 Tsu-Chr6 48837548 48842264 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03684 K23408 - gmx:100775920 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03684 06 48837548 48842264 Tsu06g03684 06 48837548 48842264 ECH