Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03555 ATGGCTTCTACTTCAAGTTCTGCCTTGAAAAGATCTGATTCAATTGCTGATAGCATGCCTGATGCCTTGAAGCAAAGCCGTTTCCATATGAAGAAATATTTTGCcaggTTGGTTGCAAATGGGAAAAGGTTGGTGAGACTAAATCatataatggaagaaatggagaaaacaattgaagataaaaatgagaggaaaaagcTTTTGGAGGGCTTATTGGGATACATTCTAAGTTGCACTCAAGAGGCAGCTATTGTTCCACCATATGTTGTTTTTGCTGTGAGGCCAAATCCTGGCTTTTGGGAATATGTTAAAGTGAATGCAGATGATTTGCAAGTAGATGGTATTGAGGCTTCAGATTACTTGAAATACAAGGAATTGGTATTTGATGAAAAGTGGGCAAGTGATGAAAATGCTTTGGAGATAGATTTTGGGGCTATTGATTTCACCACACCTCATATGGCACTTTCATCTTCTATTGGAAATGGACTTGACTTTACTACAAGAATCTTGACCTCAAGGTTGAGTGAAAGTTCACACAGTGAAAATCCATTACTTGATTACTTATTAAGCCTTAATCATCAAGGAGAGAATCTTATGATCAAAGACACTTTGAATACAATACCAAAGCTTCAGAAAGCACTTAAAATAGCAGAAGCTTATGTATCTGCTCACCACAAAGATACACCATACCAGAATTTTGAAAACAGGTTGAGAGAATGGGGATTTGATAAAGGGTGGGGAAACACTGCAGGAAGGGTTAAAGAGACAATGAAAATGCTATCTGAGGTATTAGAAGCTGGAGATCCAATTAAATTGGAATCACTTTTCAGCAGGCTTCCAAACATGTTCAACATTGTTATTTTCTCTATTCATGGATATTTTGGACAAGCTGATGTTCTAGGATTGCCAGACACTGGAGGCCAGGTTGTATATATTCTTGATCAAGTAAGAGCATTAGAGGAAGAATTACTCCAAAAGATTGAGTTGCAAGGCCTAAATGCAAAGCCTCAAATTCTTGTGGTTACACGTCTAATACCAAATGCAAAAGGGACAACATGTAACCAAGAACTTGAACCTATTATCAACACTAAGCACTCTCATATTCTAAGAGTCCCTTTCTGGACAGAGAAGGGAATTTTATCTCAATGGGTTTCGCGATTCGATATCTATCCTTATTTAGAAAGATTTGCTCAGGATTCTTCTACCAAGATTCTTGAACTTATGGATGGTAAACCTGATCTCATTATTGGAAATTATACTGATGGAAACTTGGTGTCATCCTTAATGGCTTCTAAACTTGGCGTAACTCAGGCAACCATTGCTCATGCTTTGGAGAAGACAAAATATGAAGATTCAGATGCTAAATGGAATAGTTTTGATGAAAAGTATCACTTTTCAAGTCAATTCACAGCTGATTTAATCTCAATGAATTCTGCTGATTTCATCATAACAAGTACATACCAAGAAATTGCTGGAAGTAAGGATAGGGCAGGACAATATGAAACTCATACTGCATTCACCATGCCGGGACTTTGTCGCGTAGTCTCTGGCATCAATGTATTTGATCCAAAGTTCAACATTGCTGCTCCAGGAGCTGATCAATCTGTGTATTTTCCTTATACTGAGAAAAACCAAAGATTGACTGCTTTTCAACCTGCCATTGAAGAATTACTTTATAGTAAAAGTGAAAATGAAGAACACATTGGATTTTTGGAAGACAAGAAGAAACCAATAATTTTCTCAATGGCAAGGCTTGACAAAGTGAAAAACATTAGTGGCCTAGTCGAGTGGTTCGCAAAGAATAAGAGGCTAAGAAGTTTGGTAAATCTTGTGATTGTCGGAGGATTCTTCGATTCTTCAAAATCCAAAGACAGAGAAGAAACAGAAGAAATCAAGAAGATGCATTTCTTGATTAAAGAACACAAACTTCATGGTCAGTTTAGATGGATTGCTGCACAAACCGATCGATATCGCAACGGAGAGCTTTATCGATGCATTGCAGATACAAAAGGAGCTTTTGTTCAACCAGCATTGTATGAAGCTTTTGGTCTTACAGTAATTGAAGCAATGAACTGTGGATTACCAACTTTTGCAACAAATCAAGGTGGTCCAGCTGAAATTATAGTTGATGGTGTTTCTGGTTTTCATATTGATCCTCATAATGGAGAtgaatcaatcaacaaaatttctgaattttttgAGAAGTGCAAGACTAATCCTGATTATTGGAACATAATCTCTAAAGCCGGTCTTCAAAGAATCAATGAACGCTATACATGGAAGATATATGCAAACAAAGTGTTGAATATGGGATCAATTTATGGGTTTTGGAGAAGGTTGAACAAAGAACAAAAGTTAGCAAAGGAAAGATACATCCAAATGTTTTATAATCTTCAATTTAGAAACTTGGCAAGAAAGGTACCAATTCCTAATGAGATACCTCATCAAGATCCTCAAGCAATATCAACAACTCCATTAAAAAAAGCAGAAGCAAAAGCACAATCTACTCACAATGAAGCTCAAACAAAAGCTGAAGCACCTCAAAACCAGTTAGCATTAGCTGCAATACCATCCAAAATTGAACCTAAGCAAACACCAAGGGATGAAGGTTCAAGTAAGGAACTAGCTGCTCATAAACAAAGTGGTGATCTTTACTTTGGATTGCGTTGGTTGCTTTCAGGAATTGCTTTTATGTTCATCATTCATTACATCACTAATTATTTGGAACGTTTCTTCACATGGGAGCAATAA 2751 0.3588 MASTSSSALKRSDSIADSMPDALKQSRFHMKKYFARLVANGKRLVRLNHIMEEMEKTIEDKNERKKLLEGLLGYILSCTQEAAIVPPYVVFAVRPNPGFWEYVKVNADDLQVDGIEASDYLKYKELVFDEKWASDENALEIDFGAIDFTTPHMALSSSIGNGLDFTTRILTSRLSESSHSENPLLDYLLSLNHQGENLMIKDTLNTIPKLQKALKIAEAYVSAHHKDTPYQNFENRLREWGFDKGWGNTAGRVKETMKMLSEVLEAGDPIKLESLFSRLPNMFNIVIFSIHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLQKIELQGLNAKPQILVVTRLIPNAKGTTCNQELEPIINTKHSHILRVPFWTEKGILSQWVSRFDIYPYLERFAQDSSTKILELMDGKPDLIIGNYTDGNLVSSLMASKLGVTQATIAHALEKTKYEDSDAKWNSFDEKYHFSSQFTADLISMNSADFIITSTYQEIAGSKDRAGQYETHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKNQRLTAFQPAIEELLYSKSENEEHIGFLEDKKKPIIFSMARLDKVKNISGLVEWFAKNKRLRSLVNLVIVGGFFDSSKSKDREETEEIKKMHFLIKEHKLHGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPHNGDESINKISEFFEKCKTNPDYWNIISKAGLQRINERYTWKIYANKVLNMGSIYGFWRRLNKEQKLAKERYIQMFYNLQFRNLARKVPIPNEIPHQDPQAISTTPLKKAEAKAQSTHNEAQTKAEAPQNQLALAAIPSKIEPKQTPRDEGSSKELAAHKQSGDLYFGLRWLLSGIAFMFIIHYITNYLERFFTWEQ 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03555 916 Gene3D - 13 151 - -
Tsu06g03555 916 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 301 769 - -
Tsu06g03555 916 Coils Coil 44 71 - -
Tsu06g03555 916 Pfam Glycosyl transferases group 1 565 735 IPR001296 GO:0016757
Tsu06g03555 916 Gene3D - 152 281 - -
Tsu06g03555 916 PANTHER SUCROSE SYNTHASE 6 7 806 - -
Tsu06g03555 916 Gene3D Glycogen Phosphorylase B; 533 760 - -
Tsu06g03555 916 Gene3D Glycogen Phosphorylase B; 286 803 - -
Tsu06g03555 916 MobiDBLite consensus disorder prediction 816 848 - -
Tsu06g03555 916 TIGRFAM sucr_synth: sucrose synthase 29 808 IPR012820 GO:0005985|GO:0016157
Tsu06g03555 916 Pfam Sucrose synthase 11 559 IPR000368 GO:0005985|GO:0016157
Tsu06g03555 916 MobiDBLite consensus disorder prediction 810 848 - -
Tsu06g03555 916 PANTHER - 7 806 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03555 Tsu-Chr6 46776784 46784266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03555 9 808 Glycosyltransferase AT4G02280 57.000 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03555 K00695 - gmx:100783965 1463.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03555 06 46776784 46784266 Tsu06g03555 06 46776784 46784266 ECH